Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C08
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524... 151 9e-37
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 148 5e-36
02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221... 147 1e-35
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 30 2.8
07_03_0869 - 22168805-22169701 29 6.4
11_01_0558 - 4396750-4396986,4397699-4398050,4398266-4398504,439... 28 8.5
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 28 8.5
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009 28 8.5
02_02_0398 - 9777596-9778146,9778229-9778400,9778522-9778639,977... 28 8.5
>03_02_0043 +
5242496-5242554,5242673-5242778,5243586-5243723,
5243794-5243979,5244075-5244275,5244362-5244460
Length = 262
Score = 151 bits (365), Expect = 9e-37
Identities = 67/120 (55%), Positives = 93/120 (77%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M TTDKLR +VKKWQTLIEA++DVKTTDGY+LR+FCIGFT + ++TCYAQ +Q+R
Sbjct: 103 MSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIR 162
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
IR+KM EI+ ++ +L+E+V+K IP+ I K+I KA I+PL++V +RKVK+L P+
Sbjct: 163 QIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPK 222
Score = 68.5 bits (160), Expect = 6e-12
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
TKIASEGLK RVFEVSLADLQ D D +++RK RL AE VQG+NVL NF G
Sbjct: 54 TKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWG 102
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 247
VDPF +KDWYD+KAPS+F+ R +G TLV+RTQG +
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTK 55
>12_02_0012 -
12309332-12310228,12311087-12311669,12311945-12312051,
12313190-12313237,12315139-12315216,12315300-12315500,
12315612-12315797,12315870-12316007,12318311-12318416,
12318529-12318587
Length = 800
Score = 148 bits (359), Expect = 5e-36
Identities = 66/120 (55%), Positives = 92/120 (76%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+FCIGFT + ++TCYAQ +Q+R
Sbjct: 103 MSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIR 162
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
IR+KM EI+ ++ +L+E+V+K IP+ I K+I KA I+PL++V +RKVK+L P+
Sbjct: 163 QIRRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPK 222
Score = 68.5 bits (160), Expect = 6e-12
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
TKIASEGLK RVFEVSLADLQ D D +++RK RL AE VQG+NVL NF G
Sbjct: 54 TKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWG 102
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 247
VDPF +KDWYD+KAPS+F+ R VG TLV+RTQG +
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTK 55
>02_02_0482 -
10819562-10819813,10820773-10820952,10822073-10822150,
10823056-10823256,10823365-10823550,10823646-10823783,
10824396-10824501,10824634-10824692
Length = 399
Score = 147 bits (356), Expect = 1e-35
Identities = 66/120 (55%), Positives = 91/120 (75%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+FCIGFT + ++TCYAQ +Q+R
Sbjct: 103 MSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIR 162
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
IR+KM EI+ + +L+E+V+K IP+ I K+I K+ I+PL++V IRKVK+L P+
Sbjct: 163 QIRRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAPK 222
Score = 69.3 bits (162), Expect = 4e-12
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
TKIASEGLK RVFEVSLADLQ D D +++RK RL AE VQGRNVL NF G
Sbjct: 54 TKIASEGLKHRVFEVSLADLQNDED--QAYRKVRLRAEDVQGRNVLTNFWG 102
Score = 60.1 bits (139), Expect = 2e-09
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 247
VDPF++KDWYD+KAP++FS R +G TLV+RTQG +
Sbjct: 21 VDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTK 55
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 450 ESLPFFNHPPELIGCEVHXRGSCRAHYVLAHIRRLI 343
++L FF P +GC V RGSCR L I+R++
Sbjct: 478 KTLMFFEGCPRRLGCTVLLRGSCREE--LKKIKRVV 511
>07_03_0869 - 22168805-22169701
Length = 298
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 310 TLTRKGLSANSD*SPNMCKDVMCSATSTXMDLTTDKLRWMVKKWQTLIEAN 462
T TR GLS N P + + + T MD++T R ++KKW+ L+ N
Sbjct: 18 TPTRIGLSRNPFVPP---PNSVPTIDRTEMDVSTSPYRDLIKKWRDLVLLN 65
>11_01_0558 -
4396750-4396986,4397699-4398050,4398266-4398504,
4398608-4398709
Length = 309
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 637 EVVNKLIPDSIAKDIXKACHGIYPLRD 717
++VN IPD + + + K C IY LR+
Sbjct: 34 QLVNTGIPDDLLERVKKVCSDIYKLRE 60
>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 364 KDVMCSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKT 477
KD+M SA T L D +R V + QT++ +I +
Sbjct: 2044 KDIMLSAAPTKRQLLQDMIRASVTQGQTIVPGHISANS 2081
>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
Length = 768
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 374 CALQLPRXWTSQPISSGGWLKNGR 445
C + R WTS +++ GW NGR
Sbjct: 668 CLRPVNRVWTSDRLATKGWQNNGR 691
>02_02_0398 -
9777596-9778146,9778229-9778400,9778522-9778639,
9778751-9779014,9779287-9779354,9779520-9780145,
9780257-9780412,9780528-9780625,9780741-9780832,
9780940-9781011
Length = 738
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 147 THSLAKIGTMSRLRLCSARGKSAPRLSTVPRXTKIASEGLKGRVF 281
T +LA I S++ LCS PRLS ++ G G +F
Sbjct: 374 TQTLASINITSKVVLCSPPSLMPPRLSLGDIIGRVIKAGANGLIF 418
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,217,258
Number of Sequences: 37544
Number of extensions: 457555
Number of successful extensions: 1113
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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