Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C08
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   140   2e-33

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  140 bits (338), Expect = 2e-33
 Identities = 67/120 (55%), Positives = 86/120 (71%)
 Frame = +1

Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
           M +T DKL  +VKKW TLIEAN  VKTTDGY LRVF I FT K     +KT Y + +++R
Sbjct: 101 MSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIR 160

Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
            IR +M   I ++VT  +L+EVV+KLIPDSI KDI K C  +YPL++V IRKVK++ RP+
Sbjct: 161 KIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPK 220



 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 37/50 (74%), Positives = 41/50 (82%)
 Frame = +3

Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFH 392
           TKIASEGLKGRVFEVSL DL    ++E  FRKF+LIAE VQG+NVL NFH
Sbjct: 53  TKIASEGLKGRVFEVSLGDLN---NSEADFRKFKLIAEDVQGKNVLTNFH 99



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = +2

Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 280
           VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQG +     ++G+ F
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVF 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,179,984
Number of Sequences: 27780
Number of extensions: 370952
Number of successful extensions: 951
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)