Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C07
         (893 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC8E11.01c ||SPAC959.01|beta-fructofuranosidase|Schizosaccharo...    28   1.6  
SPAC1D4.07c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual        27   4.8  

>SPAC8E11.01c
           ||SPAC959.01|beta-fructofuranosidase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 508

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 581 NQYVNEVTHSXIEEIVIPSDLEGVILVLIXALYFKGAWKNQXPYXEXETXAFXNHQGKQ 757
           + Y+ E+  + ++  +I   L+G I+ L  A YFKG    Q  Y    T A     G Q
Sbjct: 442 DNYILEI-EAVVDHSIIEVYLQGGIMCLTNAYYFKGDEPLQYYYLRVPTGASLAKSGMQ 499


>SPAC1D4.07c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 146

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 541 CLLTIRISSGGHHQP 585
           C +T+R+SSGGH  P
Sbjct: 78  CEITVRLSSGGHPSP 92


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,259
Number of Sequences: 5004
Number of extensions: 44011
Number of successful extensions: 107
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)