Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C07
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0012 - 7346282-7347136,7347234-7347593 44 1e-04
11_02_0011 - 7337618-7338496,7338596-7338991 41 0.001
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 40 0.002
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 40 0.002
11_02_0014 - 7352619-7352918,7353173-7353418 40 0.004
01_01_1152 + 9170628-9171899 34 0.18
11_01_0771 + 6453130-6454488 32 0.71
03_01_0476 - 3660327-3661261,3661401-3661668 32 0.71
05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447 29 5.0
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 29 6.6
10_08_0113 - 14896341-14897153 28 8.7
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 578 INQYVNEVTHSXIEEIVIPSDLEG-VILVLIXALYFKGAWKNQXPYXEXETXAFXNHQG 751
IN++V++ T+ I EI+ + G LVL+ A+YFKG W N P T F G
Sbjct: 128 INKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDG 186
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 578 INQYVNEVTHSXIEEIVIPSDLE-GVILVLIXALYFKGAWKNQXPYXEXETXAFXNHQG 751
IN++V++ T+ I EI+ + LVL+ A+YFKG W N P T F G
Sbjct: 140 INKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDG 198
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 569 AXTINQYVNEVTHSXIEEIVIPSDLEGVI-LVLIXALYFKGAWKNQXPYXEXETXAFXNH 745
A +N +V+ VT I+EI+ P ++ LVL ALYFKGAW + + + F
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 746 QGK 754
GK
Sbjct: 66 DGK 68
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 569 AXTINQYVNEVTHSXIEEIVIPSDLEGVI-LVLIXALYFKGAWKNQXPYXEXETXAFXNH 745
A +N +V +VT I+EI+ P ++ LVL ALYFKGAW + + + F
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLL 273
Query: 746 QGK 754
GK
Sbjct: 274 DGK 276
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 578 INQYVNEVTHSXIEEIVIPSDLE-GVILVLIXALYFKGAWKNQXPYXEXETXAF 736
+N +V+ VT I+ I P + LVL ALYFKGAW + + E F
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEF 522
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 578 INQYVNEVTHSXIEEIVIPSDLEGVI-LVLIXALYFKGAWKNQXPYXEXETXAFXNHQG 751
IN++V++ T+ I EI+ + + LVL+ A+YFKG W + P T F G
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDG 148
>01_01_1152 + 9170628-9171899
Length = 423
Score = 33.9 bits (74), Expect = 0.18
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 578 INQYVNEVTHSXIEEIVIPSDLEG-VILVLIXALYFKGAW 694
+N +V++ T I +++ P+ ++ ++VL A++FKG W
Sbjct: 163 VNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTW 202
>11_01_0771 + 6453130-6454488
Length = 452
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 578 INQYVNEVTHSXIEEIVIPSDL-EGVILVLIXALYFKGAWKNQXPYXEXETXAFXNHQG 751
IN + T I +++ P + +VL A+YFKG W + E F H G
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFYRHDG 235
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 31.9 bits (69), Expect = 0.71
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 335 DCLAELQAGAPKESA-EEXESTPTRPDXTKXAGRXXKGAGPRKAWEKAD 192
D AE +AGA K++A E+ E+ + +K A + GA AWEKA+
Sbjct: 282 DAAAE-KAGAAKDAAREKAEAAGEKARQSKEAAKGKAGAAKDAAWEKAE 329
>05_01_0325 - 2552808-2553895,2553999-2554300,2555014-2555447
Length = 607
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 302 SVLQLATLQDNLPRVARLHPHKCFNNKNLQA---NSGNQKETAVGNAGEKAPP 451
S + L P + P KC+N+K + +SG + AVG + E PP
Sbjct: 436 STFSVPDLNVEAPVPMDISPDKCYNSKIVPVRSNDSGGSETCAVGRSAEAEPP 488
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 323 ELQAGAPKESAEEXESTPTRPDXTKXAGRXXKGAGPRKAWEKADKDRXKD 174
E + G + E+ +STP D + AG + A P EK+D D ++
Sbjct: 1864 EREEGELPDEPEQPDSTPPVLDVGEQAGDSFRAASPAGPTEKSDVDMPEE 1913
>10_08_0113 - 14896341-14897153
Length = 270
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +2
Query: 293 HFPSVLQLATLQDNLPRVARLHPHKCFNNKNLQANSGNQKETAVGNAGEKAP 448
HFPS+ ++ + L P + K Q Q++ GN+ ++AP
Sbjct: 6 HFPSIAVTPVWDPHVSSILSLLPSPSLSGKQQQHVVDEQQQQVAGNSTDRAP 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,910,102
Number of Sequences: 37544
Number of extensions: 310380
Number of successful extensions: 868
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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