Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C06
         (965 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2YNB7 Cluster: Putative uncharacterized protein; n=1; ...    34   6.3  
UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Re...    33   8.3  

>UniRef50_A2YNB7 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 444

 Score = 33.9 bits (74), Expect = 6.3
 Identities = 23/78 (29%), Positives = 25/78 (32%)
 Frame = -3

Query: 390 GGGXPQKIXXPPXXKGVXXPPXPKGGXIFXGXXKKXXXGGVXXXGFXXPFPXXXGFSXXP 211
           GGG P  +       G   PP P GG       +    GG        P     G    P
Sbjct: 113 GGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRP 172

Query: 210 XXGXFXGXGPXXXXGGGG 157
             G   G GP    GGGG
Sbjct: 173 PGGGGGGGGPGRAPGGGG 190


>UniRef50_Q0D4Y8 Cluster: Os07g0596300 protein; n=7; Eukaryota|Rep:
           Os07g0596300 protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 754

 Score = 33.5 bits (73), Expect = 8.3
 Identities = 19/63 (30%), Positives = 19/63 (30%)
 Frame = +2

Query: 158 PPPPXXXXGPXPXKXPFXGXXEXPXXXGKGXXXPFXXTPPXXFFFXXPXNXNPPXGXGGX 337
           PPPP    GP P   P  G    P     G        PP            PP G GG 
Sbjct: 196 PPPPGARPGPPPPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPPPPGAGGR 255

Query: 338 XTP 346
             P
Sbjct: 256 APP 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,067,781
Number of Sequences: 1657284
Number of extensions: 4828423
Number of successful extensions: 6967
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6385
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89815291940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)