Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C05
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    32   0.47 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    32   0.47 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    32   0.47 
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    30   2.5  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -3

Query: 621 GXPPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPPXG 514
           G PPPP          PPPPP   F      PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791



 Score = 31.5 bits (68), Expect = 0.81
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 621 GXPPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPP 520
           G PPPP          PPPPP         GPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -3

Query: 615 PPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPP 520
           PPPP          PPPPP         GPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -1

Query: 620 GXPPPPFXXXKXXXXXXPPPPXXFFFFXXXXPPPXG 513
           G PPPP           PPPP   F      PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -3

Query: 621 GXPPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPPXG 514
           G PPPP          PPPPP   F      PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791



 Score = 31.5 bits (68), Expect = 0.81
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 621 GXPPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPP 520
           G PPPP          PPPPP         GPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -3

Query: 615 PPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPP 520
           PPPP          PPPPP         GPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -1

Query: 620 GXPPPPFXXXKXXXXXXPPPPXXFFFFXXXXPPPXG 513
           G PPPP           PPPP   F      PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = -3

Query: 621 GXPPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPPXG 514
           G PPPP          PPPPP   F      PPP G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374



 Score = 31.5 bits (68), Expect = 0.81
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 621 GXPPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPP 520
           G PPPP          PPPPP         GPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 327



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -3

Query: 615 PPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPP 520
           PPPP          PPPPP         GPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -1

Query: 620 GXPPPPFXXXKXXXXXXPPPPXXFFFFXXXXPPPXG 513
           G PPPP           PPPP   F      PPP G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -3

Query: 615 PPPPXFXXXKXXXXPPPPPXXXFFFFXXGPPPXGG 511
           PPPP          PPPPP          PPP  G
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,316,986
Number of Sequences: 27780
Number of extensions: 302849
Number of successful extensions: 1082
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)