Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C03
(881 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 77 8e-13
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 77 8e-13
UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13; ... 76 1e-12
UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1; ... 71 5e-11
UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10; ... 69 2e-10
UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33... 63 8e-09
UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3; E... 62 2e-08
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 60 7e-08
UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 58 4e-07
UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic... 56 9e-07
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 54 5e-06
UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, wh... 54 5e-06
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 54 5e-06
UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89 prot... 52 1e-05
UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lambl... 51 4e-05
UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putati... 51 4e-05
UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4; Tric... 46 0.002
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 45 0.003
UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15... 44 0.004
UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;... 44 0.004
UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059; ... 44 0.007
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 42 0.027
UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7; E... 42 0.027
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.063
UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=... 40 0.11
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 40 0.11
UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF5... 38 0.34
UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;... 36 1.4
UniRef50_A5DD47 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lambl... 35 3.2
UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus nor... 34 5.5
UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;... 34 5.5
UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, wh... 33 9.6
UniRef50_Q24266 Cluster: Transcription factor btd; n=2; Drosophi... 33 9.6
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
MRY GG +P+A D++K L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60
Query: 309 KLSSMPVGG 335
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
MRY GG +P+A D++K L SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 309 KLSSMPVGG 335
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>UniRef50_P42037 Cluster: 60S acidic ribosomal protein P2; n=13;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Alternaria alternata (Alternaria rot fungus)
Length = 113
Score = 76.2 bits (179), Expect = 1e-12
Identities = 34/57 (59%), Positives = 47/57 (82%)
Frame = +3
Query: 165 GGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 335
GG +P+AADV+ L SVGIEAD+++L K+I+EL GKD+ +LIA+G EKL+S+P GG
Sbjct: 13 GGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGG 69
>UniRef50_Q38M67 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 162
Score = 70.5 bits (165), Expect = 5e-11
Identities = 29/58 (50%), Positives = 47/58 (81%)
Frame = +3
Query: 165 GGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 338
GG P+ D++K L+SVG EAD ++++ ++++++GKD+ +LIAAGREKL+S+P GGG
Sbjct: 13 GGNTCPSEKDLKKILASVGAEADDDRIQLLLSQVDGKDITELIAAGREKLASVPAGGG 70
>UniRef50_P42038 Cluster: 60S acidic ribosomal protein P2; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Cladosporium herbarum (Davidiella tassiana)
Length = 111
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
M+Y G +P+A D++ LSSVGI+AD E+L ++ EL GKD+ +LI++G +
Sbjct: 1 MKYMAAYLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQ 60
Query: 309 KLSSMPVGG 335
KL+S+P GG
Sbjct: 61 KLASVPSGG 69
>UniRef50_Q9LXM8 Cluster: 60S acidic ribosomal protein P2-4; n=33;
Eukaryota|Rep: 60S acidic ribosomal protein P2-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 63.3 bits (147), Expect = 8e-09
Identities = 25/58 (43%), Positives = 43/58 (74%)
Frame = +3
Query: 165 GGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 338
GG P+A +++ + +VG + D E ++ ++ E++GKD+ +LIA+GREKL+S+P GGG
Sbjct: 13 GGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG 70
>UniRef50_Q96UQ7 Cluster: 60S acidic ribosomal protein P2; n=3;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Rhodotorula glutinis (Yeast)
Length = 110
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +3
Query: 168 GKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 335
G +P+A DV+K L++ I+AD E+L +I EL GKDV ++IA G +KL+S+P GG
Sbjct: 14 GNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPSGG 69
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
M+Y GG +P+A DV+K L SVG++++ +KL ++ L GK + +LI AG
Sbjct: 1 MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSS 60
Query: 309 KLSSMPVGGG 338
K+SS+ G G
Sbjct: 61 KVSSLSAGAG 70
>UniRef50_A1Z2Q4 Cluster: Putative uncharacterized protein; n=1;
Pectinaria gouldii|Rep: Putative uncharacterized protein
- Pectinaria gouldii (Trumpet worm) (Ice-cream cone
worm)
Length = 118
Score = 59.7 bits (138), Expect = 1e-07
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
MRY GG A ++ L SVGI+AD EKL KVI EL GKD+ ++IAA
Sbjct: 1 MRYVAAYLLAALGGNNNVDAKAIKGILGSVGIDADDEKLNKVIAELKGKDIAEVIAAD-A 59
Query: 309 KLSSMPVGG 335
KL+S+P GG
Sbjct: 60 KLASVPSGG 68
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 57.6 bits (133), Expect = 4e-07
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
M+Y GG +P+A DV K L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 309 KLSSMPVGG 335
KLSS+P GG
Sbjct: 61 KLSSVPSGG 69
>UniRef50_UPI0000DD7D25 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P2 (NY-REN-44 antigen); n=5;
Mammalia|Rep: PREDICTED: similar to 60S acidic ribosomal
protein P2 (NY-REN-44 antigen) - Homo sapiens
Length = 81
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +3
Query: 183 AAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 335
+A D++K L VG+EA + L KVI+ELNGK++E +IA G +L+S+P GG
Sbjct: 7 SAKDIKKILDRVGMEATDDWLNKVISELNGKNIEDIIAQGIGELASVPAGG 57
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 54.0 bits (124), Expect = 5e-06
Identities = 28/69 (40%), Positives = 35/69 (50%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
MRY GG TP DVEK L S +E D ++ VI + GK E++IAAG E
Sbjct: 1 MRYIAAYLLAVLGGHTTPTENDVEKILKSSDVEVDKARVAAVIKAMEGKTAEEVIAAGSE 60
Query: 309 KLSSMPVGG 335
KL+ G
Sbjct: 61 KLAKFGSAG 69
>UniRef50_A0EAT4 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
M+Y GG P D+ K L G+E+ A +K V++ L GK++ +I G++
Sbjct: 1 MKYIAAYALLVLGGNNAPTEDDITKLLKEAGVESVAADVKNVVSTLKGKNLNDVIKEGQK 60
Query: 309 KLSSMPVGGG 338
+L+S+ VGGG
Sbjct: 61 QLTSLSVGGG 70
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 177 TPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 335
TP A ++ L SVGIE + EK+ V++ L GK V++LI G EKL+++P G
Sbjct: 16 TPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAG 68
>UniRef50_UPI0000F2E68D Cluster: PREDICTED: similar to Wdr89
protein; n=4; Monodelphis domestica|Rep: PREDICTED:
similar to Wdr89 protein - Monodelphis domestica
Length = 72
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +3
Query: 165 GGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 332
G +P + DV+K L ++ I+AD E+LK VI N K++E LI+ G KL SMP G
Sbjct: 10 GSNDSPNSKDVKKILGNINIKADEERLK-VIGNFNSKNIEDLISQGSNKLDSMPNG 64
>UniRef50_Q7QU70 Cluster: GLP_226_29574_29942; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29574_29942 - Giardia lamblia
ATCC 50803
Length = 122
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +3
Query: 165 GGKXTPAAADVEKXLSSVGIEADAEKLKKVITEL--NGKDVEQLIAAGREKLSSMPVGG 335
GGK PA AD+EK +++VG DA+ K V+ ++ G VE L++ G+++++SMP G
Sbjct: 13 GGKNEPAVADIEKIIAAVGGTTDADLAKTVVEKVGAGGLSVEDLMSLGKKRMASMPAVG 71
>UniRef50_Q4UE75 Cluster: 60S acidic ribosomal protein p2, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein p2,
putative - Theileria annulata
Length = 110
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +3
Query: 168 GKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 338
G +P+ DV L+SVG E D + L + ++GK V + I+AG +KL ++P GGG
Sbjct: 16 GNESPSKDDVRDVLNSVGSEVDEDALSAFFSAVSGKVVHETISAGLDKLQTLPAGGG 72
>UniRef50_A2FPV1 Cluster: 60s Acidic ribosomal protein; n=4;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 106
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
M+Y G P V+K L + G+E DA +L+ V+T+++ K V++L+ G+
Sbjct: 1 MKYIAAYLLSKAAGNEKPTQEQVKKILEAAGVEVDAAQLEAVVTKMSEKSVDELVETGKT 60
Query: 309 KLSSMPVGG 335
+++ VGG
Sbjct: 61 EMNK--VGG 67
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
MR+ GG +P DV L +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 59 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 118
Query: 309 KLS 317
L+
Sbjct: 119 MLA 121
>UniRef50_P26795 Cluster: 60S acidic ribosomal protein P2-B; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P2-B -
Trypanosoma cruzi
Length = 112
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 171 KXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPV 329
K TP AADVE + GIE +++ L V+ + G+ V L+A G K+S++ V
Sbjct: 16 KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAAKMSAVAV 68
>UniRef50_Q06382 Cluster: 60S acidic ribosomal protein P2-2; n=6;
Eukaryota|Rep: 60S acidic ribosomal protein P2-2 -
Leishmania infantum
Length = 111
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 171 KXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMP 326
K +P+ ADVE +V I+ D L V+ + G+DV LIA G K+S+MP
Sbjct: 16 KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAKMSAMP 67
>UniRef50_UPI000049954E Cluster: hypothetical protein 12.t00059;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 12.t00059 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +3
Query: 168 GKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPV 329
G A V++ L++ G E D K+K+V +NGK+V ++I AG++++ SM V
Sbjct: 13 GHENAEEAKVKEILTAAGAEIDEAKIKQVFDAMNGKNVWEVIEAGKKQMGSMAV 66
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 41.5 bits (93), Expect = 0.027
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVI 257
MRY GG +P + D++K L SVGIE D E+L KV+
Sbjct: 1 MRYVAAYLLAVLGGNESPTSKDLKKILDSVGIETDDERLNKVV 43
>UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Plasmodium falciparum
Length = 112
Score = 41.5 bits (93), Expect = 0.027
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
M+Y GG P+ +V+ L +V + + E L I L GK +LI G +
Sbjct: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLK 62
Query: 309 KLSSMPVGGG 338
KL + +GGG
Sbjct: 63 KLQN--IGGG 70
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 40.3 bits (90), Expect = 0.063
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
MR+ GG +P DV L +VG + D +KL + ++ GKD+ +++AA RE
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA-RE 59
Query: 309 K 311
+
Sbjct: 60 R 60
>UniRef50_UPI0001509D32 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 131
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 126 KMRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 305
KM+Y G P+ ADV+ + SV DA KL + + GK++E +I AG
Sbjct: 23 KMKYVAAYALLALNGSQ-PSEADVKALIESVNGTVDATKLSSFMNVIKGKNIEDVIKAGL 81
Query: 306 EKLSSMPVGG 335
K+ + +GG
Sbjct: 82 SKVGN--IGG 89
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 39.5 bits (88), Expect = 0.11
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +3
Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
M Y +P ++K LSS+G EA+AE L KVI + N K+ E++I
Sbjct: 1 MHYMAAYLLAVLSSNKSPNCRHLKKILSSIGTEAEAEWL-KVIGKFNIKNTEEVILQESS 59
Query: 309 KLSSM 323
KL+SM
Sbjct: 60 KLASM 64
>UniRef50_UPI00015BB266 Cluster: Protein of unknown function DUF54;
n=1; Ignicoccus hospitalis KIN4/I|Rep: Protein of
unknown function DUF54 - Ignicoccus hospitalis KIN4/I
Length = 147
Score = 37.9 bits (84), Expect = 0.34
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 168 GKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 335
G + A DVE L ++ +E +AE +KKVI L GK+ E +GR++ SS+ G
Sbjct: 95 GTPSLAEEDVESPLGAITVEVEAEDVKKVIAWLTGKEGE---VSGRDEDSSVRQNG 147
>UniRef50_UPI000049A172 Cluster: hypothetical protein 154.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 154.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 109
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 189 ADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREK 311
A V++ LS+ G E D K+K+V +NGK+V ++I R K
Sbjct: 20 AKVKEILSAAGAEIDEAKIKEVFDAMNGKNVWEVIELERNK 60
>UniRef50_A5DD47 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1750
Score = 35.1 bits (77), Expect = 2.4
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -2
Query: 337 PPPTGIDDSFSRPA----AISCSTSLPLSSVITFLSFSASASIPTELRXFSTSAAAGVXL 170
P P GID++ S A A+S S S +S S +AS+S P S+SAA+
Sbjct: 329 PTPPGIDETSSSVAASSSAVSSSASSSAASSSAASSSAASSSAPASSSAVSSSAASSSAA 388
Query: 169 PPSTASKXAAT 137
S AS AA+
Sbjct: 389 SSSAASSSAAS 399
>UniRef50_Q7QU71 Cluster: GLP_226_29764_29144; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_226_29764_29144 - Giardia lamblia
ATCC 50803
Length = 206
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 301 PAAISCSTSLPLSSVITFLSFSASASI--PTELRXFSTSAAAGVXLPPSTASKXAA 140
P + ST P + + F+ SAS+ PT FS SA AG LPP A + AA
Sbjct: 5 PRLMRSSTERPPAPTFSTTVFARSASVVPPTAAIIFSMSATAGSFLPPILARRYAA 60
>UniRef50_Q8CHJ1-2 Cluster: Isoform 2 of Q8CHJ1 ; n=1; Rattus
norvegicus|Rep: Isoform 2 of Q8CHJ1 - Rattus norvegicus
(Rat)
Length = 107
Score = 33.9 bits (74), Expect = 5.5
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 168 GKXTPAAADVEKXLSSVGIEADAEKLKKVIT 260
G +P+A D++K L S+GI+ ++L KV+T
Sbjct: 47 GNSSPSAKDIKKILDSMGIKVGGDQLNKVVT 77
>UniRef50_P23632 Cluster: 60S acidic ribosomal protein P2-A; n=9;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P2-A
- Trypanosoma cruzi
Length = 107
Score = 33.9 bits (74), Expect = 5.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 177 TPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKL 314
TP+ + VE L + G+ D ++ + E GKD + + G+ KL
Sbjct: 16 TPSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKSKL 61
>UniRef50_A0EGR2 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 124
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 165 GGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSM 323
GG +P DV L IE + +++ +I L KD+ Q+I G+ K+ +
Sbjct: 70 GGNKSPTMYDVAYVLRQADIEPNLPEIEALIKSLKYKDLNQVIKEGKLKMPQL 122
>UniRef50_Q24266 Cluster: Transcription factor btd; n=2; Drosophila
melanogaster|Rep: Transcription factor btd - Drosophila
melanogaster (Fruit fly)
Length = 644
Score = 33.1 bits (72), Expect = 9.6
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2
Query: 307 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRXFSTSAAAGVXLPPSTASKXAAT 137
S P++ S S S+ S +F S SAS S PT T+AAAG T+S +++
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSSSPSSS 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,938,844
Number of Sequences: 1657284
Number of extensions: 4814780
Number of successful extensions: 13105
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 12436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13061
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -