Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C03
         (881 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    88   1e-17
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    88   1e-17
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    88   1e-17
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    88   2e-17
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    88   2e-17
Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.         33   0.52 
AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-P...    33   0.52 
AY084183-1|AAL89921.1|  315|Drosophila melanogaster RE62247p pro...    31   2.8  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 43/70 (61%), Positives = 50/70 (71%)
 Frame = +3

Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           MRY         GGK +PA +D+EK LSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 309 KLSSMPVGGG 338
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 43/70 (61%), Positives = 50/70 (71%)
 Frame = +3

Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           MRY         GGK +PA +D+EK LSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 309 KLSSMPVGGG 338
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 43/70 (61%), Positives = 50/70 (71%)
 Frame = +3

Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           MRY         GGK +PA +D+EK LSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 309 KLSSMPVGGG 338
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = +3

Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           MRY         GGK +PA  D+EK LSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 309 KLSSMPVGGG 338
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 43/70 (61%), Positives = 49/70 (70%)
 Frame = +3

Query: 129 MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           MRY         GGK +PA  D+EK LSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 309 KLSSMPVGGG 338
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.
          Length = 644

 Score = 33.1 bits (72), Expect = 0.52
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = -2

Query: 307 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRXFSTSAAAGVXLPPSTASKXAAT 137
           S P++ S S S+  S   +F S SAS S PT      T+AAAG      T+S  +++
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSSSPSSS 204


>AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-PA
           protein.
          Length = 644

 Score = 33.1 bits (72), Expect = 0.52
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = -2

Query: 307 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRXFSTSAAAGVXLPPSTASKXAAT 137
           S P++ S S S+  S   +F S SAS S PT      T+AAAG      T+S  +++
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSSSPSSS 204


>AY084183-1|AAL89921.1|  315|Drosophila melanogaster RE62247p
           protein.
          Length = 315

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = -2

Query: 307 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRXFSTSAAAG 179
           S P++ S S S+  S   +F S SAS S PT      T+AAAG
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAG 190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,852,289
Number of Sequences: 53049
Number of extensions: 240131
Number of successful extensions: 580
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)