Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B21
         (890 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    37   0.79 
UniRef50_Q8IU42 Cluster: Formin homology protein A; n=2; Dictyos...    35   3.2  

>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 36.7 bits (81), Expect = 0.79
 Identities = 31/87 (35%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
 Frame = -3

Query: 465 FXXXPXXFFFFXXXRXKXXFFFXKXXRGGXPPPXXGFXFXXXXF--XPPQXXXXXXXXXX 292
           F   P  FF     R     FF K  RGG PPP          F   PP           
Sbjct: 56  FFFFPHFFFPPPPRRGGGGVFFYKKKRGGPPPPPTTQKKKNFFFSPPPPPSFWGXFFGGG 115

Query: 291 XXXXXXXKRG--XPX*KGXPPPLIFWG 217
                   RG   P   G PPPL FWG
Sbjct: 116 GGFVXXPPRGGAPPPPGGAPPPLFFWG 142


>UniRef50_Q8IU42 Cluster: Formin homology protein A; n=2;
           Dictyostelium discoideum|Rep: Formin homology protein A
           - Dictyostelium discoideum (Slime mold)
          Length = 1218

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 16/42 (38%), Positives = 17/42 (40%)
 Frame = +3

Query: 261 PPFXXLXGGGGGXPXYPXXXFXGXKXXPXXKXTPXXGGXPPP 386
           PP   + GGGG  P  P     G    P     P  GG PPP
Sbjct: 667 PPPPPMTGGGGPPPPPPPPPMTGGGPPPPPPPPPMTGGGPPP 708


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,988,734
Number of Sequences: 1657284
Number of extensions: 5605645
Number of successful extensions: 69719
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38228
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)