Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B21
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054516-1|AAH54516.1|  666|Homo sapiens amyloid beta (A4) precu...    26   5.4  
AL160287-2|CAH70339.1|  666|Homo sapiens amyloid beta (A4) precu...    26   5.4  
AB085852-1|BAC41256.1|  666|Homo sapiens proline-rich protein 73...    26   5.4  

>BC054516-1|AAH54516.1|  666|Homo sapiens amyloid beta (A4)
           precursor protein-binding, family B, member 1
           interacting pro protein.
          Length = 666

 Score = 26.2 bits (55), Expect(2) = 5.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 828 GGGGXXXXXXXXXXPXPPPPP 766
           GGGG          P PPPPP
Sbjct: 542 GGGGLPAPPDDFLPPPPPPPP 562



 Score = 23.4 bits (48), Expect(2) = 5.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 786 PXPPPPPP 763
           P PPPPPP
Sbjct: 599 PPPPPPPP 606


>AL160287-2|CAH70339.1|  666|Homo sapiens amyloid beta (A4)
           precursor protein-binding, family B, member 1
           interacting pro protein.
          Length = 666

 Score = 26.2 bits (55), Expect(2) = 5.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 828 GGGGXXXXXXXXXXPXPPPPP 766
           GGGG          P PPPPP
Sbjct: 542 GGGGLPAPPDDFLPPPPPPPP 562



 Score = 23.4 bits (48), Expect(2) = 5.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 786 PXPPPPPP 763
           P PPPPPP
Sbjct: 599 PPPPPPPP 606


>AB085852-1|BAC41256.1|  666|Homo sapiens proline-rich protein 73
           protein.
          Length = 666

 Score = 26.2 bits (55), Expect(2) = 5.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 828 GGGGXXXXXXXXXXPXPPPPP 766
           GGGG          P PPPPP
Sbjct: 542 GGGGLPAPPDDFLPPPPPPPP 562



 Score = 23.4 bits (48), Expect(2) = 5.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 786 PXPPPPPP 763
           P PPPPPP
Sbjct: 599 PPPPPPPP 606


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,647,667
Number of Sequences: 237096
Number of extensions: 1275534
Number of successful extensions: 16289
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8809
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)