Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B21
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77655-1|CAB01137.1|  393|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (gr...    30   2.6  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    25   3.2  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ...    28   7.8  
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z77655-1|CAB01137.1|  393|Caenorhabditis elegans Hypothetical
           protein C56A3.1 protein.
          Length = 393

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +3

Query: 282 GGGGGXPXYPXXXFXGXKXXPXXKXTPXXGGXPPP 386
           GGGGG   Y      G    P     P  GG PPP
Sbjct: 127 GGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPP 161


>U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (grd
           related) protein22 protein.
          Length = 162

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 755 PXXGGGGGGXGXXXXXXXXXXPPPP 829
           P  GGGGGG G          PPPP
Sbjct: 21  PMAGGGGGGGGCAPAAPACAPPPPP 45


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 25.4 bits (53), Expect(2) = 3.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 767 GGGGGXGXXXXXXXXXXPPPP 829
           GGGGG G          PPPP
Sbjct: 37  GGGGGCGGGGGCGGGCAPPPP 57



 Score = 22.6 bits (46), Expect(2) = 3.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 755 PXXGGGGGGXG 787
           P  GGGGGG G
Sbjct: 21  PSGGGGGGGGG 31


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 828 GGGGXXXXXXXXXXPXPPPPPP 763
           GGGG          P PPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPP 312


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 828 GGGGXXXXXXXXXXPXPPPPPP 763
           GGGG          P PPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPP 312


>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
           protein Y46G5A.1b protein.
          Length = 1021

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 2   TGXFXXXPSPTXGPSFTDFCSXVAXPAFXGMPRF 103
           +G +   P P   PSFT   +    P   G PRF
Sbjct: 360 SGGYPRVPVPRHSPSFTSSATVYPLPGTGGRPRF 393


>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
           protein Y46G5A.1a protein.
          Length = 1085

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 2   TGXFXXXPSPTXGPSFTDFCSXVAXPAFXGMPRF 103
           +G +   P P   PSFT   +    P   G PRF
Sbjct: 360 SGGYPRVPVPRHSPSFTSSATVYPLPGTGGRPRF 393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,097,890
Number of Sequences: 27780
Number of extensions: 159209
Number of successful extensions: 2277
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)