Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_B20
(1331 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 37 0.031
04_03_1022 - 21778315-21779007 32 1.2
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 31 1.6
12_02_0299 - 17051570-17052474,17053542-17053755 31 2.1
06_03_1326 - 29355467-29355817 31 2.1
07_03_0890 - 22332768-22333382 31 2.7
03_05_0067 - 20460206-20460703,20461255-20461530 31 2.7
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 30 4.7
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 4.7
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 30 4.7
12_01_0981 + 9931542-9931606,9931779-9933105 29 6.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.3
02_02_0359 - 9390175-9390416,9390924-9391044,9391069-9391410,939... 25 7.4
06_03_0696 + 23617687-23617851,23618838-23619536 29 8.3
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 29 8.3
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 37.1 bits (82), Expect = 0.031
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
PPPPP P G F PP PPPP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPP 570
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPPXL 510
PPPPP P PP PPPP L
Sbjct: 566 PPPPPPPPPLPQSNYASSQPPPPPPPPPL 594
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPPXL 510
PPPP P G PP PPPP L
Sbjct: 669 PPPPRSSSRTPTGAATSSKGPPPPPPPPL 697
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 595 PPPPXXXXXPXXXXXXFFFXPPXPPPP 515
PPPP P F PP PPPP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPP 571
>04_03_1022 - 21778315-21779007
Length = 230
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
PPPPP P PP PPPP
Sbjct: 17 PPPPPATRARPPCSSAHLLPPPPPPPP 43
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 605 KXXPPPPPXXXXXPXGXXXXFFXPPXPPPPXLXXXXP 495
K PPPPP P PP P PP L P
Sbjct: 962 KRPPPPPPPPNVAPPPFTRQDIPPPPPSPPPLPITQP 998
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 595 PPPPXXXXXPXXXXXXFFFXPPXPPPPXLXXXXPP 491
PPPP P F PP PPPP PP
Sbjct: 234 PPPPPFLPFPLPPIP--FLTPPSPPPPAFPFPLPP 266
>06_03_1326 - 29355467-29355817
Length = 116
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 492 GGXXXXKXGGGGXGGXKKXXXXXXXGXXXXXGGGG 596
GG K GGGG GG K G GGGG
Sbjct: 7 GGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGGG 41
>07_03_0890 - 22332768-22333382
Length = 204
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 595 PPPPXXXXXPXXXXXXFFFXPPXPPPPXLXXXXPPK 488
PPPP P PP PPPP PP+
Sbjct: 84 PPPPPPPPPPERAVPEAADTPPPPPPPTAPTPTPPE 119
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 595 PPPPXXXXXPXXXXXXFFFXPPXPPPPXLXXXXPP 491
PPPP P F PP PPP PP
Sbjct: 5 PPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPP 39
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
PPPPP P F P PPPP
Sbjct: 4 PPPPPQWAMGPPPPPQYFQAGPPPPPP 30
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 605 KXXPPPPPXXXXXPXGXXXXFFXPPXPPP 519
K PPPPP P + PP PPP
Sbjct: 427 KPAPPPPPQKNPPPNLKGQCYGQPPPPPP 455
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
PPPPP G PP PPPP
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPPPPPP 258
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
PPPPP P PP PPPP
Sbjct: 353 PPPPPPPPPPPPPKLNTAPKPPPPPPP 379
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
PPPPP P PP PPPP
Sbjct: 354 PPPPPPPPPPPPKLNTAPKPPPPPPPP 380
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 29.5 bits (63), Expect = 6.3
Identities = 19/81 (23%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = -2
Query: 595 PPPPXXXXXPXXXXXXFFFXPPXPPPPXLXXXXPPKKKXXXVFFFFXXKKKXXXPKKKXX 416
PPPP FF PPPP PP+ FF + +
Sbjct: 49 PPPPNHIPTTERNTSVFFNTSTIPPPPPPHFPQPPQYTPLNQFFPYQPQYPYQPHTPFPV 108
Query: 415 GXXF-FFXXPPPXFXXXGETP 356
+ ++ PPP TP
Sbjct: 109 PWDYHYYPNPPPHVPPISSTP 129
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
PPPPP P PP PPPP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPP 370
>02_02_0359 -
9390175-9390416,9390924-9391044,9391069-9391410,
9392400-9392759
Length = 354
Score = 25.0 bits (52), Expect(2) = 7.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 535 PPXPPPPXLXXXXPPKKKXXXVFFF 461
PP PPPP PP ++ + F
Sbjct: 40 PPPPPPPPSQPSAPPAREGRNGYVF 64
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 547 FFFXPPXPPPP 515
F PP PPPP
Sbjct: 34 FLLPPPPPPPP 44
>06_03_0696 + 23617687-23617851,23618838-23619536
Length = 287
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 605 KXXPPPPPXXXXXPXGXXXXFFXPPXPPPPXLXXXXPTQ 489
K PPPPP P P PPPP L P Q
Sbjct: 74 KQTPPPPPPPPPPPSPPATHDVGQP-PPPPSLAAPPPAQ 111
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 312 GXXPPKXPXGXGXXKRGPKXGXXRGXGPGEXXXQXGG 202
G PP P G GP+ G G G G Q GG
Sbjct: 461 GRGPPPYPGGGMGGAGGPRGGGGSGYGVGGPNYQQGG 497
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,410,425
Number of Sequences: 37544
Number of extensions: 357155
Number of successful extensions: 4510
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2537
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4178635068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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