Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B20
         (1331 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    33   0.34 
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    33   0.34 
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    30   4.2  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    30   4.2  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    29   5.6  

>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -3

Query: 399 FXXPPPFFXXXXKPPXXXKXPPXXKIFRGGXXPPKXP 289
           F  PPP F     PP     PP   +FRGG  PP  P
Sbjct: 320 FMPPPPHFGMG--PPRGFMPPPHPMMFRGGPYPPFFP 354


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -3

Query: 399 FXXPPPFFXXXXKPPXXXKXPPXXKIFRGGXXPPKXP 289
           F  PPP F     PP     PP   +FRGG  PP  P
Sbjct: 320 FMPPPPHFGMG--PPRGFMPPPHPMMFRGGPYPPFFP 354


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
           PPPPP     P      F  PP PPPP
Sbjct: 95  PPPPPMMGGIPP-PPPMFGAPPPPPPP 120



 Score = 29.5 bits (63), Expect = 5.6
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
 Frame = -3

Query: 390 PPPFFXXXXKPPXXXKX--PPXXKIFRGGXXPPKXPXGXGXXKRGPK 256
           PPP F     PP       PP   +F G   PP  P G G   + P+
Sbjct: 86  PPPMFAGGIPPPPPMMGGIPPPPPMF-GAPPPPPPPSGLGVAPQPPR 131


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -1

Query: 596  PPPPPXXXXXPXGXXXXFFXPPXPPPPXLXXXXPT 492
            PPPPP     P         PP PPPP      PT
Sbjct: 1338 PPPPPPPPPPPSDDLTPV--PPPPPPPPTMSKAPT 1370


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -1

Query: 596 PPPPPXXXXXPXGXXXXFFXPPXPPPP 516
           PPPP      P G     F P  PPPP
Sbjct: 719 PPPPGVGPPPPQGIPPMGFDPNKPPPP 745


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,215,151
Number of Sequences: 27780
Number of extensions: 212472
Number of successful extensions: 1550
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3735997402
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)