Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B17
         (919 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.                  31   4.4  
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.                  31   5.9  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   5.9  

>M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.
          Length = 573

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 24/94 (25%), Positives = 27/94 (28%), Gaps = 3/94 (3%)
 Frame = -1

Query: 523 PXNXITXPQPHLRGPIPLXXXKRXXPQNQTPXTPEXXPILXPKKTAXTPPXNXXQXSXXS 344
           P    T P P    P P        P   TP  P   PI  P  T   PP         +
Sbjct: 128 PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTT 187

Query: 343 XWT---XXXPXXTXXTKKXXPSPXXXLPNLSFPS 251
             T      P     T    P+    LP  + PS
Sbjct: 188 TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 221



 Score = 30.7 bits (66), Expect = 7.7
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = -1

Query: 529 PHPXNXITXPQPHLRGPIPLXXXKRXXPQNQTPXTPEXXPILXPKKTAXTPP 374
           P P    T   P    P P        P   TP  P   PI  P  T   PP
Sbjct: 244 PSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPP 295


>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
          Length = 1270

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 24/94 (25%), Positives = 27/94 (28%), Gaps = 3/94 (3%)
 Frame = -1

Query: 523  PXNXITXPQPHLRGPIPLXXXKRXXPQNQTPXTPEXXPILXPKKTAXTPPXNXXQXSXXS 344
            P    T P P    P P        P   TP  P   PI  P  T   PP         +
Sbjct: 845  PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTT 904

Query: 343  XWT---XXXPXXTXXTKKXXPSPXXXLPNLSFPS 251
              T      P     T    P+    LP  + PS
Sbjct: 905  TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 938



 Score = 30.7 bits (66), Expect = 7.7
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = -1

Query: 529  PHPXNXITXPQPHLRGPIPLXXXKRXXPQNQTPXTPEXXPILXPKKTAXTPP 374
            P P    T   P    P P        P   TP  P   PI  P  T   PP
Sbjct: 961  PSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPP 1012


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 24/94 (25%), Positives = 27/94 (28%), Gaps = 3/94 (3%)
 Frame = -1

Query: 523  PXNXITXPQPHLRGPIPLXXXKRXXPQNQTPXTPEXXPILXPKKTAXTPPXNXXQXSXXS 344
            P    T P P    P P        P   TP  P   PI  P  T   PP         +
Sbjct: 1470 PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTT 1529

Query: 343  XWT---XXXPXXTXXTKKXXPSPXXXLPNLSFPS 251
              T      P     T    P+    LP  + PS
Sbjct: 1530 TTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1563



 Score = 30.7 bits (66), Expect = 7.7
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = -1

Query: 529  PHPXNXITXPQPHLRGPIPLXXXKRXXPQNQTPXTPEXXPILXPKKTAXTPP 374
            P P    T   P    P P        P   TP  P   PI  P  T   PP
Sbjct: 1586 PSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPP 1637


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,535,068
Number of Sequences: 237096
Number of extensions: 933354
Number of successful extensions: 1162
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)