Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B14
         (897 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   1.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   4.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.9  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/39 (30%), Positives = 14/39 (35%)
 Frame = +3

Query: 759 PPPXXXPLXPXAPXSXXPXPPXXXXPXPPPLXXPPLXPP 875
           P P      P  P +          P  PPL  PP+ PP
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/33 (33%), Positives = 12/33 (36%)
 Frame = +3

Query: 777 PLXPXAPXSXXPXPPXXXXPXPPPLXXPPLXPP 875
           PL      S  P P     P P PL  P +  P
Sbjct: 71  PLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEP 103


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 327 YALFICSLFIIV 362
           Y  F CSLFI+V
Sbjct: 49  YVTFFCSLFIVV 60


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 65  HMAYGVNSVEGFKAQWTLQPAKYDND 142
           HM     + EG K+Q  +  + YD+D
Sbjct: 585 HMLIPKGTPEGMKSQLFVMISNYDDD 610


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/39 (28%), Positives = 13/39 (33%)
 Frame = +3

Query: 759 PPPXXXPLXPXAPXSXXPXPPXXXXPXPPPLXXPPLXPP 875
           P P      P  P +          P  PPL  PP+  P
Sbjct: 153 PNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAP 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,797
Number of Sequences: 336
Number of extensions: 4010
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)