Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B13
         (844 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0264 + 2030080-2031270                                           54   1e-07
01_03_0090 - 12347165-12348349                                         53   3e-07
01_02_0051 - 10655867-10657057                                         52   4e-07

>05_01_0264 + 2030080-2031270
          Length = 396

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 44/150 (29%), Positives = 57/150 (38%), Gaps = 5/150 (3%)
 Frame = +1

Query: 49  FXLWRPXSXAGLPGRXLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKAG 228
           F +  P   AGL GR +++                                    +V +G
Sbjct: 241 FVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASG 300

Query: 229 LCRRCMVXVAXAXGVAXPXSXXVFXXGTSHKTSATTALHRTKXISIYXPGKIVKXLNLXA 408
           L RRC+V V+ A GV  P S  V   GT  +      L   K    + PG I+  L+L  
Sbjct: 301 LARRCIVQVSYAIGVPEPLSVFVDTYGTG-RIPDKEILKIVKENFDFRPGMIIINLDLKK 359

Query: 409 P---IYQXTSTYGHFGR--AGFPWEXPKPL 483
                Y  T+ YGHFGR    F WE  KPL
Sbjct: 360 GGNGRYLKTAAYGHFGRDDPDFTWEVVKPL 389


>01_03_0090 - 12347165-12348349
          Length = 394

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 44/152 (28%), Positives = 57/152 (37%), Gaps = 4/152 (2%)
 Frame = +1

Query: 49  FXLWRPXSXAGLPGRXLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKAG 228
           F +  P   AGL GR +++                                    +V +G
Sbjct: 240 FVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASG 299

Query: 229 LCRRCMVXVAXAXGVAXPXSXXVFXXGTSHKTSATTALHRTKXISIYXPGKIVKXLNLX- 405
           L RRC+V V+ A GV  P S  V   GT  K      L   K    + PG +   L+L  
Sbjct: 300 LARRCIVQVSYAIGVPEPLSVFVDSYGTG-KIPDKEILKIVKENFDFRPGMMTINLDLKR 358

Query: 406 -APIYQXTSTYGHFGR--AGFPWEXPKPLIVE 492
               +  T+ YGHFGR    F WE  KPL  E
Sbjct: 359 GGNRFIKTAAYGHFGREDPDFTWEVVKPLKYE 390


>01_02_0051 - 10655867-10657057
          Length = 396

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 44/150 (29%), Positives = 55/150 (36%), Gaps = 5/150 (3%)
 Frame = +1

Query: 49  FXLWRPXSXAGLPGRXLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKAG 228
           F +  P   AGL GR +++                                    +V  G
Sbjct: 241 FVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANG 300

Query: 229 LCRRCMVXVAXAXGVAXPXSXXVFXXGTSHKTSATTALHRTKXISIYXPGKIVKXLNLXA 408
           L RRC+V V+ A GV  P S  V   GT  K      L        + PG I+  L+L  
Sbjct: 301 LARRCIVQVSYAIGVPEPLSVFVDTYGTG-KIPDREILRIVTENFDFRPGMIIINLDLMR 359

Query: 409 P---IYQXTSTYGHFGR--AGFPWEXPKPL 483
                Y  T+ YGHFGR    F WE  KPL
Sbjct: 360 GGNGRYLKTAAYGHFGREDPDFTWEVVKPL 389


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,623
Number of Sequences: 37544
Number of extensions: 232409
Number of successful extensions: 349
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)