Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_B12
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 33 0.23
10_05_0093 - 9108883-9109068,9109156-9109248,9109363-9109441,910... 31 1.2
11_06_0610 - 25449085-25453284 30 2.1
09_04_0197 - 15522167-15523524,15525416-15525683 30 2.1
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 29 3.8
09_06_0095 + 20833313-20835073 29 5.0
01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819 29 5.0
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 29 6.6
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 29 6.6
07_01_1113 - 10292781-10293299 28 8.7
05_03_0064 + 7946548-7946961 28 8.7
05_01_0495 - 4136871-4136906,4137043-4137171,4137545-4137694,413... 28 8.7
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 28 8.7
03_06_0309 - 33039006-33039184,33039753-33039912 28 8.7
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 28 8.7
01_05_0144 - 18585776-18586223,18586338-18586417 28 8.7
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 33.5 bits (73), Expect = 0.23
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +2
Query: 491 TENEWNEGRNQTVKALEDAIEG-EKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYA 667
T N E Q K E+A+ G E+ E A ++LL + ++N L+++ ++ +
Sbjct: 183 TINAKEELVRQHAKVTEEAVLGWEQAESEVAALKKLLEASAQKNGSLEVQVSHLAEKNAS 242
Query: 668 YSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRCIADL 829
RLD L++ + LAQ+ + VTK+ + EN L I +L
Sbjct: 243 LEVQVSRLDEALKECVRQLHLAQEDQAEKVHDVVTKSQELESENSKLQNRITEL 296
>10_05_0093 -
9108883-9109068,9109156-9109248,9109363-9109441,
9109529-9109639,9109715-9109857,9110050-9110522,
9110568-9111075,9111241-9111810,9111883-9112119,
9112196-9112465
Length = 889
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 724 PSRPEAHGXLDSEXRDQGDHSGPXEPXPGPLHR 822
P+RP A G + + G +S P +P P P R
Sbjct: 40 PTRPPADGSSSDDSDEPGKYSSPSDPHPSPKRR 72
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 697 PAREVERGAPSRPEAHGXLDSEXRDQGDHSGPXEPXPGPLHRGP 828
PA E APS P +HG E ++ P EP P P P
Sbjct: 443 PAYEEPPAAPSTPTSHGPPPPE--EESPEEPPEEPTPSPTPSSP 484
>09_04_0197 - 15522167-15523524,15525416-15525683
Length = 541
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 468 GWTRKLKRPRTNGTKVGTKP 527
G++++L RPR+NGT + TKP
Sbjct: 416 GFSQRLTRPRSNGTYLSTKP 435
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 452 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQ 631
P L + +D+E+ E + G + K DAI EK +EL I K+ VLL+
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITWEKESLITELRKELQISDKEHRVLLK 96
>09_06_0095 + 20833313-20835073
Length = 586
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 587 QELLIQAKKENVLLQLEAAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHM 745
+EL +QA+KE +EAA + A ++ R Q K + +R +HM
Sbjct: 324 RELKVQARKEAEKFWIEAAATAKKAQALQDLEERYKQQFIKPSYDREDISEHM 376
>01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819
Length = 266
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 503 WNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 658
W G T A+ E E+T++W A E +Q + ++E +Y+ +L
Sbjct: 28 WRHGAPPTYDAVNSLFEAERTQEWPAGSLEETVQNAIKT--WEMELSYKAKL 77
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 476 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE-AAYRE 652
+E+E + NEG N+ K ++ EK + + E L A + N L+ E + RE
Sbjct: 337 REIECLHKQLNEGENKASKERSRRMKSEKLVKTLSSQVEQLRSANERNANLERELSECRE 396
Query: 653 R 655
R
Sbjct: 397 R 397
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 340 CGSGNIPVQQGNLCNGARILLRTVTAGH 423
CG + PV++GN CNGA + GH
Sbjct: 542 CGVVSSPVRRGNYCNGATKQQKLYQNGH 569
>07_01_1113 - 10292781-10293299
Length = 172
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 191 SASDVATHDQKTFARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLA 352
S+ D AT + PG +RL + + + H + GP+ G+GL+
Sbjct: 91 SSVDAATKGNPPRSARTTSAPGSLRLPEVAQRVVELLHHRHWWFGPWALGLGLS 144
>05_03_0064 + 7946548-7946961
Length = 137
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +1
Query: 595 PHPGQEGERAPAARGRLQGEAHVRL-LRGXAASGL--PAREVERGAPSRPEAHGXLDSE 762
P P ER P L+ A + LR + G+ P R R P+RPE + DSE
Sbjct: 24 PRPATTLERHPPVHPGLRPAAAAAVQLRRLSDFGVSVPRRMARRSPPTRPEGYSTSDSE 82
>05_01_0495 -
4136871-4136906,4137043-4137171,4137545-4137694,
4137782-4137847,4138124-4138168,4139022-4139102,
4139202-4139283,4139571-4139642,4140473-4140573,
4140690-4140806,4140929-4141249
Length = 399
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 274 YS*RMVPILPLENWCDGS 327
Y+ RM PI+P+ENW GS
Sbjct: 213 YNPRMDPIIPVENWRKGS 230
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +1
Query: 586 TGAPHPGQEGERAPAARGRLQGEAHVR--LLRGXAASGLPAREVERGAPSRP-EAHGXLD 756
T A P Q P RL+ +A + RG P R RG P+RP +++ D
Sbjct: 25 TCAAPPRQRPPPGPTKHRRLRHDADAQPPRKRGHPPPPPPRRTRTRGPPARPQQSYTDDD 84
Query: 757 SEXRDQGDHSG 789
E DQ + G
Sbjct: 85 EEEDDQDEEEG 95
>03_06_0309 - 33039006-33039184,33039753-33039912
Length = 112
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 497 SRSLQLPCPTKQPILVRISREPHTP*PAVTVRSNIR 390
+RS+ LP P +P + PH P AV R +R
Sbjct: 11 ARSMALPIPLARPPPLATVARPHPPQDAVQARDGVR 46
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 143 SGASKQTACTALVARGSASDVATHDQKTFAR 235
+ A K AC ALV+RG A+D + + AR
Sbjct: 630 AAAGKLEACRALVSRGGAADAGSETALSVAR 660
>01_05_0144 - 18585776-18586223,18586338-18586417
Length = 175
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +1
Query: 595 PHPGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQ 774
PHP Q + PA + + R G G P R +E A E E R +
Sbjct: 12 PHPSQPFIKTPANKTNIIAR---RFANGSRGFGAPRRLLEASAKREGEGEARKAEEIRRE 68
Query: 775 GD 780
GD
Sbjct: 69 GD 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,575,035
Number of Sequences: 37544
Number of extensions: 448705
Number of successful extensions: 1544
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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