Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B12
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    28   0.43 
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    26   1.8  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   7.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   7.1  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   9.4  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 592 APHPGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHG 747
           A  PG +G++       + G           A GLP R+ E+G P RP   G
Sbjct: 514 AGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRDGEKGEPGRPGLPG 565



 Score = 27.5 bits (58), Expect = 0.57
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHG 747
           PGQ+G    A    L+G+   R  +G   +   A+E   GAP  P   G
Sbjct: 505 PGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRDG 553



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
 Frame = +1

Query: 589 GAPH-PGQEGERAPAARGRLQGEAHVRLLRGXAAS-------GLPAREVER---GAPSRP 735
           GAP  PG++GE+    R  L G    R L+G           G+   + ER   G P RP
Sbjct: 544 GAPGLPGRDGEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRP 603

Query: 736 EAHG 747
            A G
Sbjct: 604 GASG 607


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 409 QSGVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRV 302
           +SG I VLH +  L    CC  HT     R+    V
Sbjct: 575 RSGFILVLHGVPGLQQLCCCIRHTPPAIARNVGSSV 610


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 626 LQLEAAYRERLMYAYSEVXRRLDYQLEKSNVER 724
           + L   YR + M  YS   + LD++L+ S   R
Sbjct: 170 IPLSDTYRNQSMTYYSSEVQSLDFELDTSGSTR 202


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
 Frame = +1

Query: 604 GQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGDH 783
           G +GE        L GE     L G    GL  R+ +RG P  P     + +   D+G+ 
Sbjct: 424 GFKGEPGRIGERGLMGEKGDMGLTGPV--GLSGRKGDRGVPGSPGLPATVAAIKGDKGEP 481

Query: 784 SGPXE-PXPGPLHRGPGFAG 840
             P     PG +   PG +G
Sbjct: 482 GFPGAIGRPGKV-GVPGLSG 500


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 188 PVRLVLCTRSVCSHLNAKP 132
           P  +V CTR+VC+  N  P
Sbjct: 117 PSMIVKCTRNVCTGRNEVP 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,774
Number of Sequences: 2352
Number of extensions: 15407
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)