Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_B12
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 171 3e-42
BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 171 4e-42
BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 171 4e-42
AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 171 4e-42
AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 171 4e-42
AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 170 5e-42
BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 168 3e-41
AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 132 1e-30
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 36 0.15
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 33 1.0
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 33 1.0
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 33 1.0
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 33 1.0
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 33 1.0
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 33 1.0
BC112112-1|AAI12113.1| 656|Homo sapiens coiled-coil domain cont... 33 1.4
BC112108-1|AAI12109.1| 656|Homo sapiens hypothetical protein LO... 33 1.4
AL365330-1|CAI42526.1| 656|Homo sapiens novel protein protein. 33 1.4
AL136528-1|CAI19122.1| 656|Homo sapiens novel protein protein. 33 1.4
AK057387-1|BAB71462.1| 656|Homo sapiens protein ( Homo sapiens ... 33 1.4
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 33 1.8
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 33 1.8
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 33 1.8
U78971-1|AAB47504.1| 404|Homo sapiens Sam68deltaKH protein. 32 2.4
M88108-1|AAA59990.1| 443|Homo sapiens p62 protein. 32 2.4
BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein. 32 2.4
BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 2.4
BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, R... 32 2.4
BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein. 32 2.4
BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, R... 32 2.4
AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, R... 32 2.4
AL445248-1|CAH71944.1| 404|Homo sapiens KH domain containing, R... 32 2.4
AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, R... 32 2.4
AL139249-1|CAI21971.1| 404|Homo sapiens KH domain containing, R... 32 2.4
AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens ... 32 2.4
AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein... 32 2.4
AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 2.4
AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48 rece... 32 2.4
AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha ... 32 2.4
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 32 2.4
DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger pr... 32 3.2
AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger ... 32 3.2
U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein ... 31 4.2
BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich intera... 31 4.2
AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich intera... 31 4.2
AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich intera... 31 4.2
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 31 5.6
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 31 5.6
D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen prot... 31 5.6
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 31 5.6
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 7.3
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 7.3
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 7.3
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 7.3
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 7.3
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 7.3
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 7.3
>X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b
protein.
Length = 256
Score = 171 bits (416), Expect = 3e-42
Identities = 99/248 (39%), Positives = 139/248 (56%), Gaps = 7/248 (2%)
Frame = +2
Query: 119 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 280
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 281 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 457
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 458 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 638 AAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRC 817
YRERL Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +C
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKC 239
Query: 818 IADLASLA 841
IADL LA
Sbjct: 240 IADLKLLA 247
>BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 171 bits (415), Expect = 4e-42
Identities = 99/248 (39%), Positives = 139/248 (56%), Gaps = 7/248 (2%)
Frame = +2
Query: 119 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 280
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 281 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 457
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 458 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 638 AAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRC 817
YRERL Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +C
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKC 239
Query: 818 IADLASLA 841
IADL LA
Sbjct: 240 IADLKLLA 247
>BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 171 bits (415), Expect = 4e-42
Identities = 99/248 (39%), Positives = 139/248 (56%), Gaps = 7/248 (2%)
Frame = +2
Query: 119 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 280
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 281 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 457
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 458 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 638 AAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRC 817
YRERL Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +C
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKC 239
Query: 818 IADLASLA 841
IADL LA
Sbjct: 240 IADLKLLA 247
>AY871272-1|AAX11428.1| 256|Homo sapiens cell
proliferation-inducing protein 47 protein.
Length = 256
Score = 171 bits (415), Expect = 4e-42
Identities = 99/248 (39%), Positives = 139/248 (56%), Gaps = 7/248 (2%)
Frame = +2
Query: 119 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 280
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 281 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 457
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 458 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 638 AAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRC 817
YRERL Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +C
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKC 239
Query: 818 IADLASLA 841
IADL LA
Sbjct: 240 IADLKLLA 247
>AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 171 bits (415), Expect = 4e-42
Identities = 99/248 (39%), Positives = 139/248 (56%), Gaps = 7/248 (2%)
Frame = +2
Query: 119 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 280
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 281 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 457
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 458 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 638 AAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRC 817
YRERL Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +C
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKC 239
Query: 818 IADLASLA 841
IADL LA
Sbjct: 240 IADLKLLA 247
>AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit b
isoform 1 pr protein.
Length = 256
Score = 170 bits (414), Expect = 5e-42
Identities = 99/248 (39%), Positives = 139/248 (56%), Gaps = 7/248 (2%)
Frame = +2
Query: 119 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 280
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 281 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 457
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 458 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 638 AAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRC 817
YRERL Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +C
Sbjct: 180 VTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVGKHVVQSISTQQEKETIAKC 239
Query: 818 IADLASLA 841
IADL LA
Sbjct: 240 IADLKLLA 247
>BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 168 bits (408), Expect = 3e-41
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 7/248 (2%)
Frame = +2
Query: 119 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 280
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 281 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 457
EE+FQF + KTGVTGPY G GL Y SK IYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 458 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Query: 638 AAYRERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRC 817
YRERL Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +C
Sbjct: 180 VTYRERLYRVYKEVRNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKC 239
Query: 818 IADLASLA 841
IADL LA
Sbjct: 240 IADLKLLA 247
>AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 195
Score = 132 bits (320), Expect = 1e-30
Identities = 69/180 (38%), Positives = 102/180 (56%), Gaps = 1/180 (0%)
Frame = +2
Query: 305 SKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDKE 481
S GPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP +A + DK
Sbjct: 8 SAAATAGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIK-KYGPFVADFADKL 66
Query: 482 VEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLM 661
E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE YRERL
Sbjct: 67 NEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLY 126
Query: 662 YAYSEVXRRLDYQLEKSNVERRLAQKHMVXWIVSXVTKAITPDXENXXLDRCIADLASLA 841
Y EV RLDY + N+ RR Q+HM+ W+ V ++I+ E + +CIADL LA
Sbjct: 127 RVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADLKLLA 186
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 36.3 bits (80), Expect = 0.15
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 473 DKEVEATENEWNEGRNQTVKALEDAIEGEKTE-QWRAQGQELLIQAKKENVLLQLEAAYR 649
D ++EA N WN G + K +E EK + Q + I +K N + +L+ YR
Sbjct: 201 DSDIEARLNSWNLGLDMKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYR 260
Query: 650 ERLMYAYSEVXRRLDYQLE 706
+ + E R+L+ +++
Sbjct: 261 SK-QHETEETIRKLEKKVQ 278
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 33.5 bits (73), Expect = 1.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R +QG V L +G P + ++G P G D+G+
Sbjct: 976 PGEKGPQGPAGRDGVQGP--VGLPGPAGPAGSPGEDGDKGEIGEPGQKG----SKGDKGE 1029
Query: 781 HSGPXEP-XPGPLHRGPGFAG 840
+ P P GP+ PG AG
Sbjct: 1030 NGPPGPPGLQGPV-GAPGIAG 1049
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 33.5 bits (73), Expect = 1.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R +QG V L +G P + ++G P G D+G+
Sbjct: 1092 PGEKGPQGPAGRDGVQGP--VGLPGPAGPAGSPGEDGDKGEIGEPGQKG----SKGDKGE 1145
Query: 781 HSGPXEP-XPGPLHRGPGFAG 840
+ P P GP+ PG AG
Sbjct: 1146 NGPPGPPGLQGPV-GAPGIAG 1165
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 33.5 bits (73), Expect = 1.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R +QG V L +G P + ++G P G D+G+
Sbjct: 1053 PGEKGPQGPAGRDGVQGP--VGLPGPAGPAGSPGEDGDKGEIGEPGQKG----SKGDKGE 1106
Query: 781 HSGPXEP-XPGPLHRGPGFAG 840
+ P P GP+ PG AG
Sbjct: 1107 NGPPGPPGLQGPV-GAPGIAG 1126
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 33.5 bits (73), Expect = 1.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R +QG V L +G P + ++G P G D+G+
Sbjct: 1104 PGEKGPQGPAGRDGVQGP--VGLPGPAGPAGSPGEDGDKGEIGEPGQKG----SKGDKGE 1157
Query: 781 HSGPXEP-XPGPLHRGPGFAG 840
+ P P GP+ PG AG
Sbjct: 1158 NGPPGPPGLQGPV-GAPGIAG 1177
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 33.5 bits (73), Expect = 1.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R +QG V L +G P + ++G P G D+G+
Sbjct: 1092 PGEKGPQGPAGRDGVQGP--VGLPGPAGPAGSPGEDGDKGEIGEPGQKG----SKGDKGE 1145
Query: 781 HSGPXEP-XPGPLHRGPGFAG 840
+ P P GP+ PG AG
Sbjct: 1146 NGPPGPPGLQGPV-GAPGIAG 1165
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 33.5 bits (73), Expect = 1.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R +QG V L +G P + ++G P G D+G+
Sbjct: 303 PGEKGPQGPAGRDGVQGP--VGLPGPAGPAGSPGEDGDKGEIGEPGQKG----SKGDKGE 356
Query: 781 HSGPXEP-XPGPLHRGPGFAG 840
+ P P GP+ PG AG
Sbjct: 357 NGPPGPPGLQGPV-GAPGIAG 376
>BC112112-1|AAI12113.1| 656|Homo sapiens coiled-coil domain
containing 27 protein.
Length = 656
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>BC112108-1|AAI12109.1| 656|Homo sapiens hypothetical protein
LOC148870 protein.
Length = 656
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>AL365330-1|CAI42526.1| 656|Homo sapiens novel protein protein.
Length = 656
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>AL136528-1|CAI19122.1| 656|Homo sapiens novel protein protein.
Length = 656
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>AK057387-1|BAB71462.1| 656|Homo sapiens protein ( Homo sapiens
cDNA FLJ32825 fis, clone TESTI2003074, weakly similar to
TRICHOHYALIN. ).
Length = 656
Score = 33.1 bits (72), Expect = 1.4
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 470 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 649
++ E E + E E R Q ++A+ D + ++ + QE++ +K+N LL+ + +
Sbjct: 460 INTENETLQKELRE-RRQQLQAMTDKFSNLREDK---KHQEMMGLIEKDNQLLRQQVSEL 515
Query: 650 ERLMYAYSEVXRRLDYQLEKSNVERRLAQKHMVXW 754
ER + V LD ++ + + L Q H+ W
Sbjct: 516 ERKLTKRDCVISELDTKVSQLQEQVELDQNHLQRW 550
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 467 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 467 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 467 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 637
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>U78971-1|AAB47504.1| 404|Homo sapiens Sam68deltaKH protein.
Length = 404
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 260 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 319
Query: 799 PXPGP 813
P P P
Sbjct: 320 PPPAP 324
>M88108-1|AAA59990.1| 443|Homo sapiens p62 protein.
Length = 443
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 299 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 358
Query: 799 PXPGP 813
P P P
Sbjct: 359 PPPAP 363
>BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein.
Length = 626
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 67 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 126
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 127 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 186
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 187 LAAEAEGDRESELSEVPEAGGEGL 210
>BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 299 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 358
Query: 799 PXPGP 813
P P P
Sbjct: 359 PPPAP 363
>BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein.
Length = 381
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 299 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 358
Query: 799 PXPGP 813
P P P
Sbjct: 359 PPPAP 363
>BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 299 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 358
Query: 799 PXPGP 813
P P P
Sbjct: 359 PPPAP 363
>AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 299 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 358
Query: 799 PXPGP 813
P P P
Sbjct: 359 PPPAP 363
>AL445248-1|CAH71944.1| 404|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 404
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 260 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 319
Query: 799 PXPGP 813
P P P
Sbjct: 320 PPPAP 324
>AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 299 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 358
Query: 799 PXPGP 813
P P P
Sbjct: 359 PPPAP 363
>AL139249-1|CAI21971.1| 404|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 404
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 260 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 319
Query: 799 PXPGP 813
P P P
Sbjct: 320 PPPAP 324
>AK091346-1|BAC03643.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ34027 fis, clone FCBBF2003549, highly similar to
GAP-associated tyrosine phosphoprotein p62 (Sam68). ).
Length = 418
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 625 PAARGRLQGEAHVRLLRGXAASGLPAR--EVERGAPSRPEAHGXLDSEXRDQGDHSGPXE 798
P RGR G L+RG G R V RG P P G R G P
Sbjct: 274 PVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVPPPPTVRGAPAPRARTAGIQRIPLP 333
Query: 799 PXPGP 813
P P P
Sbjct: 334 PPPAP 338
>AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein
B48 receptor type 2 protein.
Length = 1076
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.3 bits (70), Expect = 2.4
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = +2
Query: 248 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 427
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 428 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 592
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 593 LLIQAK--KENVLLQLEAAYRERL 658
L +A+ +E+ L ++ A E L
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEGL 672
>AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha I
chain, short form protein.
Length = 678
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG +G+R P +G+ RG GLP + + G P + + +G+
Sbjct: 258 PGDQGQRGPPGEAGPKGDRGAEGARG--IPGLPGPKGDTGLPG-VDGRDGIPGMPGTKGE 314
Query: 781 HSGPXEPXPGPLHRGPGFAG 840
P P LH PG G
Sbjct: 315 PGKPGPPGDAGLHGLPGVPG 334
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG +G+R P +G+ RG GLP + + G P + + +G+
Sbjct: 501 PGDQGQRGPPGEAGPKGDRGAEGARG--IPGLPGPKGDTGLPG-VDGRDGIPGMPGTKGE 557
Query: 781 HSGPXEPXPGPLHRGPGFAG 840
P P LH PG G
Sbjct: 558 PGKPGPPGDAGLHGLPGVPG 577
>DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger
protein protein.
Length = 858
Score = 31.9 bits (69), Expect = 3.2
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +1
Query: 589 GAPHPGQEG--ERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSE 762
G H G G RAPA G + L+RG G AR E PS P A D +
Sbjct: 14 GGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEASGPSPPPAEDDSDGD 73
>AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger C
protein.
Length = 858
Score = 31.9 bits (69), Expect = 3.2
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +1
Query: 589 GAPHPGQEG--ERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSE 762
G H G G RAPA G + L+RG G AR E PS P A D +
Sbjct: 14 GGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEASGPSPPPAEDDSDGD 73
>U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein
protein.
Length = 1266
Score = 31.5 bits (68), Expect = 4.2
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +1
Query: 589 GAPHPGQ-EGERAPAARGRLQGEAHVRLLRGXAASGLPAREVE-RGAPSRPEAHGXLDS- 759
GA P + G++APA RG L G + P R + P R +AHG DS
Sbjct: 462 GAAGPAEGPGKKAPAERGLLNGHVKKEVPERSLERNRPKRATAGKSTPGR-QAHGKADSA 520
Query: 760 --EXRDQGDHSGPXEP-XPGPLHRGPGFAG 840
E R +P G +G G AG
Sbjct: 521 SCENRSTSQPESVHKPQDSGKAEKGGGKAG 550
>BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 31.5 bits (68), Expect = 4.2
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +1
Query: 589 GAPHPGQ-EGERAPAARGRLQGEAHVRLLRGXAASGLPAREVE-RGAPSRPEAHGXLDS- 759
GA P + G++APA RG L G + P R + P R +AHG DS
Sbjct: 462 GAAGPAEGPGKKAPAERGLLNGHVKKEVPERSLERNRPKRATAGKSTPGR-QAHGKADSA 520
Query: 760 --EXRDQGDHSGPXEP-XPGPLHRGPGFAG 840
E R +P G +G G AG
Sbjct: 521 SCENRSTSQPESVHKPQDSGKAEKGGGKAG 550
>AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 31.5 bits (68), Expect = 4.2
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +1
Query: 589 GAPHPGQ-EGERAPAARGRLQGEAHVRLLRGXAASGLPAREVE-RGAPSRPEAHGXLDS- 759
GA P + G++APA RG L G + P R + P R +AHG DS
Sbjct: 462 GAAGPAEGPGKKAPAERGLLNGHVKKEVPERSLERNRPKRATAGKSTPGR-QAHGKADSA 520
Query: 760 --EXRDQGDHSGPXEP-XPGPLHRGPGFAG 840
E R +P G +G G AG
Sbjct: 521 SCENRSTSQPESVHKPQDSGKAEKGGGKAG 550
>AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 31.5 bits (68), Expect = 4.2
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +1
Query: 589 GAPHPGQ-EGERAPAARGRLQGEAHVRLLRGXAASGLPAREVE-RGAPSRPEAHGXLDS- 759
GA P + G++APA RG L G + P R + P R +AHG DS
Sbjct: 462 GAAGPAEGPGKKAPAERGLLNGHVKKEVPERSLERNRPKRATAGKSTPGR-QAHGKADSA 520
Query: 760 --EXRDQGDHSGPXEP-XPGPLHRGPGFAG 840
E R +P G +G G AG
Sbjct: 521 SCENRSTSQPESVHKPQDSGKAEKGGGKAG 550
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 31.1 bits (67), Expect = 5.6
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPA-ARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQG 777
PG G PA A GR + G G P + RGAP P G +D + G
Sbjct: 1235 PGSSGPPGPAGATGRAPKDIPDPGPPGD--QGPPGPDGPRGAPGPPGLPGSVDLLRGEPG 1292
Query: 778 DHSGPXEPXPGPLHRGPGFAG 840
D P P P PG+ G
Sbjct: 1293 DCGLPGPPGPPGPPGPPGYKG 1313
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 31.1 bits (67), Expect = 5.6
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPA-ARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQG 777
PG G PA A GR + G G P + RGAP P G +D + G
Sbjct: 1235 PGSSGPPGPAGATGRAPKDIPDPGPPGD--QGPPGPDGPRGAPGPPGLPGSVDLLRGEPG 1292
Query: 778 DHSGPXEPXPGPLHRGPGFAG 840
D P P P PG+ G
Sbjct: 1293 DCGLPGPPGPPGPPGPPGYKG 1313
>D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen
protein.
Length = 472
Score = 31.1 bits (67), Expect = 5.6
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPA-ARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQG 777
PG G PA A GR + G G P + RGAP P G +D + G
Sbjct: 17 PGSSGPPGPAGATGRAPKDIPDPGPPGD--QGPPGPDGPRGAPGPPGLPGSVDLLRGEPG 74
Query: 778 DHSGPXEPXPGPLHRGPGFAG 840
D P P P PG+ G
Sbjct: 75 DCGLPGPPGPPGPPGPPGYKG 95
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 31.1 bits (67), Expect = 5.6
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPA-ARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQG 777
PG G PA A GR + G G P + RGAP P G +D + G
Sbjct: 1235 PGSSGPPGPAGATGRAPKDIPDPGPPGD--QGPPGPDGPRGAPGPPGLPGSVDLLRGEPG 1292
Query: 778 DHSGPXEPXPGPLHRGPGFAG 840
D P P P PG+ G
Sbjct: 1293 DCGLPGPPGPPGPPGPPGYKG 1313
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 7.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R LQG V L G P + ++G P G D+G+
Sbjct: 1122 PGEKGPQGPAGRDGLQGP--VGLPGPAGPVGPPGEDGDKGEIGEPGQKG----SKGDKGE 1175
Query: 781 HSGPXEPXP-GPLHRGPGFAG 840
P P GP+ + PG +G
Sbjct: 1176 QGPPGPTGPQGPIGQ-PGPSG 1195
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 30.7 bits (66), Expect = 7.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R +QG V L +G P + ++G P G +G+
Sbjct: 1092 PGEKGPQGPAGRDGVQGP--VGLPGPAGPAGSPGEDGDKGEIGEPGQKG----SKGGKGE 1145
Query: 781 HSGPXEP-XPGPLHRGPGFAG 840
+ P P GP+ PG AG
Sbjct: 1146 NGPPGPPGLQGPV-GAPGIAG 1165
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 30.7 bits (66), Expect = 7.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R LQG V L G P + ++G P G D+G+
Sbjct: 1122 PGEKGPQGPAGRDGLQGP--VGLPGPAGPVGPPGEDGDKGEIGEPGQKG----SKGDKGE 1175
Query: 781 HSGPXEPXP-GPLHRGPGFAG 840
P P GP+ + PG +G
Sbjct: 1176 QGPPGPTGPQGPIGQ-PGPSG 1195
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 7.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R LQG V L G P + ++G P G D+G+
Sbjct: 1122 PGEKGPQGPAGRDGLQGP--VGLPGPAGPVGPPGEDGDKGEIGEPGQKG----SKGDKGE 1175
Query: 781 HSGPXEPXP-GPLHRGPGFAG 840
P P GP+ + PG +G
Sbjct: 1176 QGPPGPTGPQGPIGQ-PGPSG 1195
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 7.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R LQG V L G P + ++G P G D+G+
Sbjct: 1122 PGEKGPQGPAGRDGLQGP--VGLPGPAGPVGPPGEDGDKGEIGEPGQKG----SKGDKGE 1175
Query: 781 HSGPXEPXP-GPLHRGPGFAG 840
P P GP+ + PG +G
Sbjct: 1176 QGPPGPTGPQGPIGQ-PGPSG 1195
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 7.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R LQG V L G P + ++G P G D+G+
Sbjct: 1122 PGEKGPQGPAGRDGLQGP--VGLPGPAGPVGPPGEDGDKGEIGEPGQKG----SKGDKGE 1175
Query: 781 HSGPXEPXP-GPLHRGPGFAG 840
P P GP+ + PG +G
Sbjct: 1176 QGPPGPTGPQGPIGQ-PGPSG 1195
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 30.7 bits (66), Expect = 7.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 601 PGQEGERAPAARGRLQGEAHVRLLRGXAASGLPAREVERGAPSRPEAHGXLDSEXRDQGD 780
PG++G + PA R LQG V L G P + ++G P G D+G+
Sbjct: 1076 PGEKGPQGPAGRDGLQGP--VGLPGPAGPVGPPGEDGDKGEIGEPGQKG----SKGDKGE 1129
Query: 781 HSGPXEPXP-GPLHRGPGFAG 840
P P GP+ + PG +G
Sbjct: 1130 QGPPGPTGPQGPIGQ-PGPSG 1149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,968,966
Number of Sequences: 237096
Number of extensions: 2506051
Number of successful extensions: 10685
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 9989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10660
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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