Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B11
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    29   4.9  
08_02_0640 - 19636968-19638230                                         29   6.5  
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053...    29   6.5  

>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 388  STNYGGRLDWANKNAQATIDLNRQI 462
            S+ +GG L W N + ++T+D +RQ+
Sbjct: 960  SSLHGGSLPWKNTDFESTVDFDRQL 984


>08_02_0640 - 19636968-19638230
          Length = 420

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 508 DPTHRSLMLSSQIXHRFVYLGQ*WLVHSCSPSLGVRRSWCCRL 380
           DPT  S++++           + +LV SC   L VRR  CCR+
Sbjct: 266 DPTWSSVLITDDDDTSTTDKKKLYLVESCGVLLMVRRKVCCRV 308


>04_03_0795 -
           19704354-19704464,19705152-19705214,19705298-19705378,
           19705468-19705623,19705711-19705785,19706477-19706587,
           19707206-19707304,19707453-19707546,19707779-19707838,
           19709262-19709334,19711448-19711490,19711533-19711606,
           19711985-19712075,19712170-19712214,19712533-19712589,
           19713440-19713544,19713817-19713932,19714625-19714634,
           19714810-19714920,19715502-19715594,19715664-19715690,
           19715736-19715798,19716326-19716451,19716812-19716949,
           19717164-19717832,19717949-19718123,19718269-19718450
          Length = 1015

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 514 YPDPTHRSLMLSSQIXHRFVYL 449
           YPDP HR+  LS Q  H +V L
Sbjct: 251 YPDPQHRTTALSLQGGHMYVLL 272


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,263,119
Number of Sequences: 37544
Number of extensions: 380186
Number of successful extensions: 829
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)