Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B07
         (851 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p pro...   156   3e-38
AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB...   156   3e-38
AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA...   156   3e-38
U03289-1|AAA03464.1|  113|Drosophila melanogaster protein ( Dros...   148   8e-36

>AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p
           protein.
          Length = 117

 Score =  156 bits (379), Expect = 3e-38
 Identities = 78/115 (67%), Positives = 82/115 (71%)
 Frame = +3

Query: 66  LPPKXXXXXXXKXPQKTQXXXXGSGGGXAKXXXWSXGXVRXKLXXXVLFDKPTYXXLYKX 245
           +PPK       K PQKTQ    GSGGG AK   WS G VR KL   VLFDK TY  LYK 
Sbjct: 1   MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60

Query: 246 VPQYKLITPAVVSEXLKVRGSLARXALIELRXKGLIKQVVQHHGXVXYTRATKGD 410
           VP YKLITP+VVSE LK+RGSLA+ ALIELR KGLIKQVVQHH  V YTRATKGD
Sbjct: 61  VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGD 115


>AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB,
           isoform B protein.
          Length = 117

 Score =  156 bits (379), Expect = 3e-38
 Identities = 78/115 (67%), Positives = 82/115 (71%)
 Frame = +3

Query: 66  LPPKXXXXXXXKXPQKTQXXXXGSGGGXAKXXXWSXGXVRXKLXXXVLFDKPTYXXLYKX 245
           +PPK       K PQKTQ    GSGGG AK   WS G VR KL   VLFDK TY  LYK 
Sbjct: 1   MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60

Query: 246 VPQYKLITPAVVSEXLKVRGSLARXALIELRXKGLIKQVVQHHGXVXYTRATKGD 410
           VP YKLITP+VVSE LK+RGSLA+ ALIELR KGLIKQVVQHH  V YTRATKGD
Sbjct: 61  VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGD 115


>AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA,
           isoform A protein.
          Length = 117

 Score =  156 bits (379), Expect = 3e-38
 Identities = 78/115 (67%), Positives = 82/115 (71%)
 Frame = +3

Query: 66  LPPKXXXXXXXKXPQKTQXXXXGSGGGXAKXXXWSXGXVRXKLXXXVLFDKPTYXXLYKX 245
           +PPK       K PQKTQ    GSGGG AK   WS G VR KL   VLFDK TY  LYK 
Sbjct: 1   MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60

Query: 246 VPQYKLITPAVVSEXLKVRGSLARXALIELRXKGLIKQVVQHHGXVXYTRATKGD 410
           VP YKLITP+VVSE LK+RGSLA+ ALIELR KGLIKQVVQHH  V YTRATKGD
Sbjct: 61  VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGD 115


>U03289-1|AAA03464.1|  113|Drosophila melanogaster protein (
           Drosophila melanogasterSevelin ribosomal protein homolog
           gene, partial cds. ).
          Length = 113

 Score =  148 bits (359), Expect = 8e-36
 Identities = 74/104 (71%), Positives = 77/104 (74%)
 Frame = +3

Query: 99  KXPQKTQXXXXGSGGGXAKXXXWSXGXVRXKLXXXVLFDKPTYXXLYKXVPQYKLITPAV 278
           K PQKTQ    GSGGG AK   WS G VR KL   VLFDK TY  LYK VP YKLITP+V
Sbjct: 8   KQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSV 67

Query: 279 VSEXLKVRGSLARXALIELRXKGLIKQVVQHHGXVXYTRATKGD 410
           VSE LK+RGSL + ALIELR KGLIKQVVQHH  V YTRATKGD
Sbjct: 68  VSERLKIRGSLDKRALIELREKGLIKQVVQHHSQVIYTRATKGD 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,149,414
Number of Sequences: 53049
Number of extensions: 290742
Number of successful extensions: 1229
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)