Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_B06
(1155 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 34 0.24
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 33 0.43
11_06_0369 - 22760383-22760440,22761410-22761497,22761582-227616... 29 5.3
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 5.3
06_01_0254 + 1898586-1899617 29 5.3
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 5.3
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 5.3
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 29 7.0
04_04_0009 + 22134160-22134696 29 7.0
01_05_0490 + 22672241-22674679 29 7.0
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 7.0
02_05_0686 - 30900748-30902167,30903442-30904742 26 7.5
02_04_0382 - 22501041-22501279,22501717-22501810 29 9.2
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 524 PTXPXPPPFFXXXGGGGGXGXXPXXFXPPPP 432
P P PPP + GGGGG G PPPP
Sbjct: 67 PQCP-PPPSYPSGGGGGGGGGTVMYTSPPPP 96
Score = 33.5 bits (73), Expect = 0.32
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 524 PTXPXPPPFFXXXGGGGGXGXXPXXFXPPPP 432
PT PPP GGGGG G + PPP
Sbjct: 65 PTPQCPPPPSYPSGGGGGGGGGTVMYTSPPP 95
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 33.1 bits (72), Expect = 0.43
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXPPPP 431
P PPPP F GG G + PPPP
Sbjct: 12 PPPPPPPFGRGGGGAGYPRGHKQLYAPPPP 41
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -2
Query: 515 PXPPPFFXXXGGGGGX--GXXPXXFXPPPP 432
P PPP F GGG G G PPPP
Sbjct: 13 PPPPPPFGRGGGGAGYPRGHKQLYAPPPPP 42
>11_06_0369 -
22760383-22760440,22761410-22761497,22761582-22761649,
22761742-22761858,22761964-22762084,22762172-22762247,
22762336-22762435,22762524-22762615,22763514-22763664,
22764698-22764792,22764900-22765193
Length = 419
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 521 TXPXPPPFFXXXGGGGGXG 465
T P PPP GGGGG G
Sbjct: 51 TPPPPPPLMAALGGGGGEG 69
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 515 PXP-PPFFXXXGGGGGXGXXPXXFXPPP 435
P P PP GGGGG G P PPP
Sbjct: 24 PCPLPPIPSCGGGGGGAGPTPPPPPPPP 51
>06_01_0254 + 1898586-1899617
Length = 343
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 484 GGGGGXXXXPXFFXPPPP 431
GGGGG P F PPPP
Sbjct: 75 GGGGGKIALPPFTQPPPP 92
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.5 bits (63), Expect = 5.3
Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = -2
Query: 524 PTXPXPPPFF--XXXGGGGGXGXXPXXFXPPPPKXXKKKXPXGXKKNTPXFFXGXXXXPP 351
P P PPP GGGG G + PPP+ ++ N P + PP
Sbjct: 8 PPPPPPPPQHPPPPQAGGGGGG---EFYRGPPPQPPMRQLSAASSTNIPGDYAAHQGHPP 64
Query: 350 XXKKXXXXFXGGAXFXXKK 294
+ G F K+
Sbjct: 65 PQQNQPPYDAYGDNFGAKR 83
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 485 GGGGGXGXXPXXFXPPPP 432
GGGGG G P PPPP
Sbjct: 22 GGGGGGGFSPTAAKPPPP 39
>09_04_0368 +
17005231-17005437,17005707-17005963,17006061-17006115,
17006196-17006276,17006357-17006453,17006560-17006627,
17006788-17006886,17007008-17007049,17007124-17007263,
17007882-17008018,17008275-17008444
Length = 450
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXP 440
P PPPP GGGGG P + P
Sbjct: 17 PPPPPPGSSSGRGGGGGGGGDPGDWKP 43
>04_04_0009 + 22134160-22134696
Length = 178
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGGG 515
G G G PPPPP K GGGG
Sbjct: 52 GRGKACGGGSTAPPPPPPSSSGKSGGGG 79
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.1 bits (62), Expect = 7.0
Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = -3
Query: 520 PXPPPPX--FFXXXGGGGGXXXXPXFFXPP-PPKX*KKXXRXXKKKTXPXFFXGXPXXPP 350
P PPPP F+ GG PP PP R +K P P PP
Sbjct: 610 PPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRPAPPPPPP 669
Query: 349 PXKK 338
P ++
Sbjct: 670 PQQQ 673
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 524 PTXPXPPPFFXXXGGGGGXGXXPXXFXPPPPKXXKKKXP 408
P P PPP F GG PPPP KK P
Sbjct: 127 PPPPPPPPPFKGDHYGGVYQNWQQNGPPPPPDHVLKKVP 165
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 25.8 bits (54), Expect(2) = 7.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 467 PPPPPPXXXKKXG 505
PPPPPP KK G
Sbjct: 364 PPPPPPPGGKKGG 376
Score = 21.4 bits (43), Expect(2) = 7.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 449 KXGXXXPPPPPP 484
K PPPPPP
Sbjct: 320 KPAAAAPPPPPP 331
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 515 PXPPPFFXXXGGGGGXGXXPXXFXPPPP 432
P P P++ GGGGG G P PPPP
Sbjct: 83 PPPSPYY---GGGGGYGKPP----PPPP 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,307,608
Number of Sequences: 37544
Number of extensions: 509193
Number of successful extensions: 6045
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5009
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3514835996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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