Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_B06
(1155 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.50
U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (gr... 31 2.0
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 2.0
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 3.6
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 3.6
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 3.6
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.2
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 6.2
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 8.2
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 8.2
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.50
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 435 GGGXKXXGXXXXPPPPPXXXKKXGGGGXG 521
GGG G PPPPP GGGG G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGG 71
Score = 32.7 bits (71), Expect = 0.50
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 435 GGGXKXXGXXXXPPPPPXXXKKXGGGGXG 521
GGG G PPPPP GGGG G
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
>U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (grd
related) protein10 protein.
Length = 282
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 500 FFXXXGGGGGXGXXPXXFXPPPP 432
FF GGGG G P PPPP
Sbjct: 23 FFGAAGGGGACGCAPRPACPPPP 45
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 396 FXXXRXFFFXXFGGGGXKXXGXXXXPPPPPXXXKKXGGG 512
F F F GGGG G PPPPP GGG
Sbjct: 10 FGCSNAFLFNLLGGGG----GGCCAPPPPPPCGGGCGGG 44
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Frame = -2
Query: 509 PPPFFXXX-----GGGGGXGXXPXXFXPPPPKXXKKKXPXGXKKNTP 384
PPPF GGGGG P + PPPP + P + P
Sbjct: 70 PPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEP 116
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGG 512
GGGG PPPPP GGG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGG 512
GGGG PPPPP GGG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGG 76
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGGGXG 521
GGGG G PPP GGGG G
Sbjct: 30 GGGGASKVGGGAAPPPGTSVYMGAGGGGGG 59
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGGGXGXXXFXXXXXXXXXXXXXXXXXXFXPPPPPG 611
GGG K G PP GGGG G PPP G
Sbjct: 31 GGGASKVGGGAAPPPGTSVYMGAGGGGGGGGAQSAYFAVGGAPVGGAPAAVSIGAPPPAG 90
Query: 612 G 614
G
Sbjct: 91 G 91
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXPPPPK 428
P PPPP G G P PPPP+
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPR 268
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXPPPPK 428
P PPPP G G P PPPP+
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPR 289
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXPPPPK 428
P PPPP G G P PPPP+
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPR 274
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGGG 515
GGGG G PPP P GGGG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGGGXG 521
GGGG G PPP GGGG G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGGG 515
GGGG G PPP P GGGG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 432 GGGGXKXXGXXXXPPPPPXXXKKXGGGGXG 521
GGGG G PPP GGGG G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXPPPPKX*KKXXRXXKKKTXPXFFXGXPXXPPP 347
P PPPP GG P PPPP P F G P PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----------PPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXPPPPKX*KKXXRXXKKKTXPXFFXGXPXXPPP 347
P PPPP GG P PPPP P F G P PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----------PPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 520 PXPPPPXFFXXXGGGGGXXXXPXFFXPPPPKX*KKXXRXXKKKTXPXFFXGXPXXPPP 347
P PPPP GG P PPPP P F G P PPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----------PPPPPGGFKGGPPPPPP 372
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -3
Query: 514 PPPPXFFXXXGGGGGXXXXPXFFXPPPPKX*KKXXRXXKKKTXPXFFXGXPXXP--PP 347
PPPP F G P F PPPP R P F G P P PP
Sbjct: 305 PPPPPHFMGRG-------MPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPP 355
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -3
Query: 514 PPPPXFFXXXGGGGGXXXXPXFFXPPPPKX*KKXXRXXKKKTXPXFFXGXPXXP--PP 347
PPPP F G P F PPPP R P F G P P PP
Sbjct: 305 PPPPPHFMGRG-------MPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPP 355
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -2
Query: 524 PTXPXPP---PFFXXXGGGGGXGXXPXXFXPPPPKXXKKKXP 408
P P PP PFF G G P F PP P + P
Sbjct: 1041 PPRPMPPQQSPFFNNAPGNGFYPPQPRDFSPPQPPQQSRMFP 1082
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 417 FFXXFGGGGXKXXGXXXXPPPPPXXXKKXGGGG 515
F GGGG G PPPPP GGGG
Sbjct: 17 FLLPSGGGG----GCGCAPPPPPPSPCGCGGGG 45
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 417 FFXXFGGGGXKXXGXXXXPPPPPXXXKKXGGGG 515
F GGGG G PPPPP GGGG
Sbjct: 17 FLFPSGGGG----GCGCAPPPPPPACGCGGGGG 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,981,933
Number of Sequences: 27780
Number of extensions: 257759
Number of successful extensions: 2150
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3140771858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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