Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B02
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical...    34   0.15 
AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical...    28   7.5  

>AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical
           protein Y37E3.17a protein.
          Length = 830

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = +3

Query: 282 YQLSKRGVNAVLL-ERAK---LTSGTTWHTAGMVWSLRPCDLEVXLLRDSRXVYSALAKE 449
           Y L+KR +  VLL ERA      SGT++H+ G+V +  P      +L  S  +YS L  E
Sbjct: 44  YHLTKRNIKDVLLLERASGVASPSGTSFHSPGLVSASHPAHRYKPILAHSIELYSKLEAE 103


>AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical
           protein Y37E3.17b protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
 Frame = +3

Query: 282 YQLSKRGVNAVLL-ERAK----------LTSGTTWHTAGMVWSLRPCDLEVXLLRDSRXV 428
           Y L+KR +  VLL ERA             SGT++H+ G+V +  P      +L  S  +
Sbjct: 44  YHLTKRNIKDVLLLERASDGDFGVHGVASPSGTSFHSPGLVSASHPAHRYKPILAHSIEL 103

Query: 429 YSALAKE 449
           YS L  E
Sbjct: 104 YSKLEAE 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,987,532
Number of Sequences: 27780
Number of extensions: 174368
Number of successful extensions: 264
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)