Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B01
         (841 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC044636-1|AAH44636.1|  520|Homo sapiens YLPM1 protein protein.        36   0.24 
AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens ...    36   0.24 
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.     36   0.24 
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.     31   3.9  
BC044311-1|AAH44311.2|  399|Homo sapiens hypothetical protein LO...    31   6.9  

>BC044636-1|AAH44636.1|  520|Homo sapiens YLPM1 protein protein.
          Length = 520

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 373 PPAGPRTLVP*AXPVNLPRXXLKSAXX*PALPKS--PAXFXPSVPKTGPPP 227
           PP+ P  ++P A P  +P   +      P+LP S  P    PS+   GPPP
Sbjct: 367 PPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPP 417


>AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33731 fis, clone BRAWH2017685, moderately
           similar to Mus musculus mRNA for nuclear protein ZAP. ).
          Length = 723

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 373 PPAGPRTLVP*AXPVNLPRXXLKSAXX*PALPKS--PAXFXPSVPKTGPPP 227
           PP+ P  ++P A P  +P   +      P+LP S  P    PS+   GPPP
Sbjct: 108 PPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPP 158


>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
          Length = 1766

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 373 PPAGPRTLVP*AXPVNLPRXXLKSAXX*PALPKS--PAXFXPSVPKTGPPP 227
           PP+ P  ++P A P  +P   +      P+LP S  P    PS+   GPPP
Sbjct: 165 PPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPP 215


>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
          Length = 1382

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 21/48 (43%), Positives = 24/48 (50%)
 Frame = -1

Query: 370 PAGPRTLVP*AXPVNLPRXXLKSAXX*PALPKSPAXFXPSVPKTGPPP 227
           P GPR  +P A P  LPR  L S    P  P  P+   PS P+ G PP
Sbjct: 28  PPGPRGPLPPASPAALPRCPLPSPGA-PG-PLLPSGAGPS-PRPGAPP 72


>BC044311-1|AAH44311.2|  399|Homo sapiens hypothetical protein
           LOC339344 protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = -1

Query: 334 PVNLPRXXLKSAXX*PALPKSP--AXFXPSVPKTGPPPTXXAQVTA 203
           PV LPR  L      P LP  P  A   PS P   PPP     ++A
Sbjct: 210 PVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPPPPPRPPPTLSA 255


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,149,804
Number of Sequences: 237096
Number of extensions: 1280257
Number of successful extensions: 2175
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)