Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_B01
         (841 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-770|AAF54255.2|  416|Drosophila melanogaster CG8007-PA,...    29   7.9  
AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,...    29   7.9  

>AE014297-770|AAF54255.2|  416|Drosophila melanogaster CG8007-PA,
           isoform A protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2

Query: 473 QQAXECGXLTRTPASQPAVWSRRXSVTEXQTSASRXSSVM 592
           Q A ECG  TRT  S P +  R+ +V   ++  SR SSV+
Sbjct: 276 QGAGECGGKTRTTTSSPCMLQRQQTV---RSHHSRNSSVI 312


>AE014297-769|AAN13390.1|  778|Drosophila melanogaster CG8007-PB,
           isoform B protein.
          Length = 778

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2

Query: 473 QQAXECGXLTRTPASQPAVWSRRXSVTEXQTSASRXSSVM 592
           Q A ECG  TRT  S P +  R+ +V   ++  SR SSV+
Sbjct: 638 QGAGECGGKTRTTTSSPCMLQRQQTV---RSHHSRNSSVI 674


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,893,668
Number of Sequences: 53049
Number of extensions: 358792
Number of successful extensions: 690
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)