Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_A19
(1047 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.009
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.022
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.038
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.067
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.067
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.20
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.47
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.62
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 29 0.82
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.4
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 4.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 4.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.009
Identities = 35/137 (25%), Positives = 40/137 (29%), Gaps = 10/137 (7%)
Frame = +2
Query: 455 SPHYXPPX-HPSXSPXSXPHPTXSXXPRXTXPP-PSXXXXXPP---PTXSTPXPPXXXXX 619
SP PP HP +P S P T P PP P PP P+ P P
Sbjct: 981 SPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTA 1040
Query: 620 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXHXPSXSPPLXPPXP-PPXPRPSXX 796
P PS +PP+ P PP P+PS
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 797 NTXXP----XXPPXPPP 835
P PP P P
Sbjct: 1101 APPVPKPSVAVPPVPAP 1117
Score = 30.7 bits (66), Expect = 0.36
Identities = 30/131 (22%), Positives = 34/131 (25%), Gaps = 1/131 (0%)
Frame = +2
Query: 449 VXSPHYXPPXHPSXSPXSXPHPTXSXXPRXTXPPPSXXXXXPPPTXSTPXPPXXXXXXXX 628
V P P P S P P S P P P PP + PP
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAP----PVPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 629 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXHXPSXSPPLXPPXP-PPXPRPSXXNTX 805
P + PP+ PP PP P+PS
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG--V 1207
Query: 806 XPXXPPXPPPP 838
P PP PP
Sbjct: 1208 PPVPPPSTAPP 1218
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Frame = +2
Query: 719 PXXHXPSXSPPLX------PPXPPPXPRPSXXNTXXPXXPPXPPPP 838
P P+ +PP+ P PPP P PS P PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 27.1 bits (57), Expect = 4.4
Identities = 31/147 (21%), Positives = 36/147 (24%), Gaps = 1/147 (0%)
Frame = +2
Query: 398 PXSXSXXXPSXXXXXTSVXSPHYXPPXHPSXSPXSXPHPTXSXXPRXTXPPPSXXXXXPP 577
P + P V +P PP P S + P P S P P P PP
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPV-PKPSVAAPPVPVPSGAP----PVPKPSVAAPP 1151
Query: 578 PTXSTPXPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXHXPSXSPPLX 757
+ PP P PP+
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Query: 758 PPXP-PPXPRPSXXNTXXPXXPPXPPP 835
PP PP P PS P PP
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 719 PXXHXPSXS-PPLXPPX-PPPXPRPSXXNTXXPXXPPXPPPPR 841
P PS + PP+ P PP P+PS P PP P+
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK 1144
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +2
Query: 719 PXXHXPSXS-PPLX-PPXPPPXPRPSXXNTXXPXXPPXPPPPR 841
P PS + PP+ P PP P+PS P PP P+
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK 1163
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.022
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 470 PPXHPSX-SPXSXPHPTXSXXPRXTXPPPSXXXXXPPPTXSTPXP 601
PP P+ +P S P S PR + PPPS P P+ + P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 29.9 bits (64), Expect = 0.62
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +2
Query: 734 PSXSPPLXPPXPP---PXPRPSXXNTXXPXXPPXPPPP 838
PS PP P P P PS + P P PPPP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 544 PXSLPPXXSTPPHXXNPXPPXXTXPPPL 627
P S PP S PP PP + PP+
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPI 167
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.038
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 840 RGG--GGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXGX*XXGXXXGGGG 697
RGG GG GG G G G GG GG RGG G G GG G
Sbjct: 11 RGGSRGGRGGFNGGR--GGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 32.7 bits (71), Expect = 0.088
Identities = 21/46 (45%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 831 GGXGGXXGXXVLXXDGRGX-GGGXGGXRGGEXXGX*XXGXXXGGGG 697
GG GG G GRG GGG GG RGG G G G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG--ARGGRGGRGG 52
Score = 31.5 bits (68), Expect = 0.20
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 834 GGGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXGX*XXGXXXGG 703
GGG GG G RG GG GG RGG G GG
Sbjct: 29 GGGRGGARGGG--RGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 837 GGGGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXG 733
GGG G G GRG GG G RGG G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = -1
Query: 837 GGGGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXGX*XXGXXXGGGG 697
G GG GG G GRG G G RGG G G G GG
Sbjct: 24 GRGGFGGGRGGA--RGGGRGGARGGRGGRGGARGG--RGGSSGGRGG 66
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.067
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 746 PPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
PP PP PPP P P PP PPPP
Sbjct: 5 PPGNPPPPPPPP-----GFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.067
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPXPPPXPRPSXXN-TXXPXXPPXPPPP 838
P P P L P PPP P PS + P PP P P
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 30.3 bits (65), Expect = 0.47
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
P P+ + PP PPP R S P PPPP
Sbjct: 277 PVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 29.5 bits (63), Expect = 0.82
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 743 SPPLXPPXPPPXPRPSXXNTXXPXXPPXPPP 835
+PP+ P P P + P PP PPP
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 29.5 bits (63), Expect = 0.82
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPP 832
P P PP PP PP PS P PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLP-MGAPAAPPLPP 451
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = +2
Query: 758 PPXPPPXPR-----PSXXNTXXPXXPPXPPPPR 841
PP PPP R P + PP PPPPR
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 743 SPPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
+PPL P P P P+ P P P PP
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 734 PSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
P +PP PP PP PS + P PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +2
Query: 449 VXSPHYXPPXHPSXSPXSXPHPTXSXXPRXTXPPPSXXXXXPPPTXSTPXPP 604
V +P PP P P S P P PPS P P PP
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 28.3 bits (60), Expect = 1.9
Identities = 32/145 (22%), Positives = 39/145 (26%), Gaps = 12/145 (8%)
Frame = +2
Query: 443 TSVXSPHYXPPXHPSXSPXSXPHPTXSXXPRXTXPPPSXXXXXPPPTXSTPXPPXXXXXX 622
TS +P PP PS P + P PP + PP + P P
Sbjct: 225 TSTSAPPI-PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283
Query: 623 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXHXPSXSPPLXP-------PXPPPXP 781
P PP+ P PPP P
Sbjct: 284 INSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Query: 782 RPSXXNTXXPXXP-----PXPPPPR 841
R + + P P P PPPPR
Sbjct: 344 RSNAAGS-IPLPPQGRSAPPPPPPR 367
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 749 PLXPPXPPPXPRPSXXNTXXPXXPPXPP 832
P PP PP P P PP PP
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPP 835
P PS P L P PP P + P P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +2
Query: 743 SPPLXPPXPPPXPRPSXXNTXXPXXPPXPPP 835
S P+ PP P P P PP P P
Sbjct: 452 SAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.20
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 734 PSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
P +P + P PPP P P P PP PPPP
Sbjct: 752 PPPAPIMGGP-PPPPPPPGVAGAGPP--PPPPPPP 783
Score = 30.7 bits (66), Expect = 0.36
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 734 PSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
P P + P P P P P PP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.3 bits (65), Expect = 0.47
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +2
Query: 734 PSXSP-PLXPPXP---PPXPRPSXXNTXXPXXPPXPPPP 838
P+ +P P+ PP P P P P PP PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPP 835
P P+ P P P P P P+ P PP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP--PPPPPP 768
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 470 PPXHPSXSPXSXPHPTXSXXPRXTXPPPSXXXXXPPPTXSTPXPP 604
P P+ P P P P PPP PPP P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPP-PPPPPPGVAGAGPPP--PPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.47
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 834 GGGXGGXXGXXVLXXDGRGX-GGGXGGXRGGEXXGX*XXGXXXGGGGW 694
GGG GG G G G GGG GG GG G GG GW
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGF-GGGPGGFGGGPGGHGGPGW 273
Score = 29.9 bits (64), Expect = 0.62
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -1
Query: 837 GGGGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXGX*XXGXXXGGGG 697
G GG GG G G GGG GG GG G GG G
Sbjct: 206 GFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.62
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 458 PHYXPPXHP-SXSPXSXPHPTXSXXPRXTXPPPSXXXXXPPPTXSTPXPP 604
P PP P S +P PT P PPPS P S P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS-APPMPAGPPSAPPPP 1734
Score = 29.9 bits (64), Expect = 0.62
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 734 PSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
P S P PP P P P P PPPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 473 PXHPSXSPXSXPHPTXSXXPRXTXPPPSXXXXXPPPTXSTPXP 601
P HP +P P PPP PPP+ + P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS-APPMP 1724
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPXPPPXPRPSXXNTXXPXXPPXPPPP 838
P P+ PP PPP P P PP PPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPP------MPAGPPSAPPP 1733
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 29.5 bits (63), Expect = 0.82
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPX-PPPXPRPSXXNTXXPXXPPXPPP 835
P + P+ S P P PPP P S T P P PP
Sbjct: 402 PTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSLPP 441
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -1
Query: 837 GGGGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXG 733
GGG GG G GRG GG GG GG G
Sbjct: 446 GGGSRGGRGGFG-----GRGGFGGRGGFGGGRGRG 475
Score = 27.5 bits (58), Expect = 3.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 831 GGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXG 733
GG GG G G G GGG G RGG G
Sbjct: 451 GGRGGFGGRGGFGGRG-GFGGGRGRGRGGARSG 482
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 837 GGGGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXG 733
GG GG G G GG GG RGG G
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 834 GGGXGGXXGXXVLXXDGRGXGGGXGGXRGGEXXG 733
GG GG G G GG GG RGG G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 4.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 758 PPXPPPXPRPSXXNT 802
PP PPP P + NT
Sbjct: 907 PPPPPPLPVKTSLNT 921
Score = 22.6 bits (46), Expect(2) = 4.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 809 PXXPPXPPPP 838
P PP PPPP
Sbjct: 942 PAFPPPPPPP 951
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 758 PPXPPPXPRPSXXNTXXPXXPPXPPPP 838
PP PPP P P P P P P
Sbjct: 356 PPPPPPMPAPIYNVPNVPTVPTVSPNP 382
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 746 PPLXPPXPPPXPRPSXXNTXXPXXPPXPPP 835
PP P P S + P PP PPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 719 PXXHXPSXSPPLXPPXPPPXPR--PSXXNT 802
P + P + PL P PPP P P NT
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNT 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,352,137
Number of Sequences: 5004
Number of extensions: 12758
Number of successful extensions: 286
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 549226150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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