Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_A07
(1312 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 33 0.34
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 33 0.34
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.45
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.59
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.59
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.59
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.78
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 1.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 1.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 1.0
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 7.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 7.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 7.3
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 9.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 9.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 9.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 9.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 9.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 9.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 9.6
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.34
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 530 PGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXP 700
P P LPPPP P P P P P P PP P P+ P
Sbjct: 69 PTESPPLPPPPL---PLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 122
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 33.5 bits (73), Expect = 0.34
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 530 PGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXP 700
P P LPPPP P P P P P P PP P P+ P
Sbjct: 291 PTESPPLPPPPL---PLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 344
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.45
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 533 GXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPP 688
G P PPPP P P P P P P PP P PP
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +2
Query: 554 PPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXP-XPPXXPSGXPPIXXPTXP 709
PPP P + P P P+ P P PP P PP+ P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +2
Query: 542 PXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXP 685
P LP PP P P P P P P P PP PS P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCP--PPPPPMPSYSP 86
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.59
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 542 PXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXP 709
P PPPP P P P LP P P PP P G PP P P
Sbjct: 726 PPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPP 777
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 551 PPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXPXAXXLP 727
PPPP P P P P P P P PP G PP P A P
Sbjct: 744 PPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +2
Query: 599 PXXAXPVPLPVXXHXPXXPXPPXXPSGXPPI--XXPTXPXAXXLPXXXXG 742
P P P P P PP P G PPI P P LP G
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.59
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 542 PXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXP 709
P PPPP P P P LP P P PP P G PP P P
Sbjct: 726 PPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPP 777
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 551 PPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXPXAXXLP 727
PPPP P P P P P P P PP G PP P A P
Sbjct: 744 PPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +2
Query: 599 PXXAXPVPLPVXXHXPXXPXPPXXPSGXPPI--XXPTXPXAXXLPXXXXG 742
P P P P P PP P G PPI P P LP G
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.59
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 542 PXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXP 709
P PPPP P P P LP P P PP P G PP P P
Sbjct: 309 PPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCPPPPPPPPP 360
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 551 PPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXPXAXXLP 727
PPPP P P P P P P P PP G PP P A P
Sbjct: 327 PPPPPGGLPPISGGPPP----PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +2
Query: 599 PXXAXPVPLPVXXHXPXXPXPPXXPSGXPPI--XXPTXPXAXXLPXXXXG 742
P P P P P PP P G PPI P P LP G
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.78
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +2
Query: 530 PGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXP 709
P P P P + P A P P P P P PP P PP P P
Sbjct: 95 PAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYP--PPPPHYPPPP 152
Query: 710 XA 715
A
Sbjct: 153 PA 154
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +2
Query: 539 RPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXP--PIXXPTXPX 712
+P PPPP P S P P P P P P P+ P + P P
Sbjct: 25 QPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPL 84
Query: 713 A 715
A
Sbjct: 85 A 85
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +2
Query: 521 RAXPGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPP 688
+A P P PPPP P P P P P PP P+G PP
Sbjct: 230 QAPPAGSPPPPPPPKGSPPLAGSGSPP----PPPAAGSPPPPRTGSPPPPPTGSPP 281
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 7/66 (10%)
Frame = +2
Query: 551 PPPPXXXXP---RXXXSXXPXXAXPVPLPVXXHXPXX----PXPPXXPSGXPPIXXPTXP 709
PPPP P R P P P P P P PP P G PP P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 710 XAXXLP 727
A P
Sbjct: 316 QAGGSP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +2
Query: 521 RAXPGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPP 688
+A P P PPPP P P P P P PP P+G PP
Sbjct: 251 QAPPAGSPPPPPPPKGSPPLAGSGSPP----PPPAAGSPPPPRTGSPPPPPTGSPP 302
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 7/66 (10%)
Frame = +2
Query: 551 PPPPXXXXP---RXXXSXXPXXAXPVPLPVXXHXPXX----PXPPXXPSGXPPIXXPTXP 709
PPPP P R P P P P P P PP P G PP P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 710 XAXXLP 727
A P
Sbjct: 337 QAGGSP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +2
Query: 521 RAXPGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPP 688
+A P P PPPP P P P P P PP P+G PP
Sbjct: 236 QAPPAGSPPPPPPPKGSPPLAGSGSPP----PPPAAGSPPPPRTGSPPPPPTGSPP 287
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 7/66 (10%)
Frame = +2
Query: 551 PPPPXXXXP---RXXXSXXPXXAXPVPLPVXXHXPXX----PXPPXXPSGXPPIXXPTXP 709
PPPP P R P P P P P P PP P G PP P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 710 XAXXLP 727
A P
Sbjct: 322 QAGGSP 327
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 31.5 bits (68), Expect = 1.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PXXAXPVPLPVXXHXPXXPXPPXXPSGXPP 688
P P P+P H P PP PS PP
Sbjct: 943 PSPPVPPPIPAIRHRTPSPPPPPLPSSTPP 972
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +2
Query: 551 PPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPT 703
PPPP P + P +P P+ P P PP P PP P+
Sbjct: 326 PPPPMKLDPSPQPAATPVEITEIP-PI-ISPPAPPPPPPPPPPPPPPQTPS 374
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 533 GXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXP-PIXXPTXP 709
G P +PPPP P P P P P PP P P P P P
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 500 PXXXXSXRAXPGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSG 679
P S PG PPPP P P P P PP PSG
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Query: 680 XPPIXXPTXP 709
I P P
Sbjct: 378 HGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 533 GXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXP-PIXXPTXP 709
G P +PPPP P P P P P PP P P P P P
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 500 PXXXXSXRAXPGXRPXLPPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSG 679
P S PG PPPP P P P P PP PSG
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Query: 680 XPPIXXPTXP 709
I P P
Sbjct: 388 HGMIPPPPPP 397
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 551 PPPPXXXXPRXXXSXXPXXAXPVPLPVXXHXP---XXPXPPXXPSGXPPIXXPTXP 709
PPPP P P P P P P P PP P P + P P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP 1393
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +2
Query: 542 PXLPPPPXXXX---PRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXP 709
P PPPP P+ + P P+ P P PP PP P P
Sbjct: 198 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +2
Query: 542 PXLPPPPXXXX---PRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXP 709
P PPPP P+ + P P+ P P PP PP P P
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +2
Query: 542 PXLPPPPXXXX---PRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXPSGXPPIXXPTXP 709
P PPPP P+ + P P+ P P PP PP P P
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 614 PVPLPVXXHXPXXPXPPXXPSGXPP 688
P P+P H P P P PSG PP
Sbjct: 112 PTPMPFPQHFP-FPGMPPMPSGPPP 135
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 614 PVPLPVXXHXPXXPXPPXXPSGXPP 688
P P+P H P P P PSG PP
Sbjct: 112 PTPMPFPQHFP-FPGMPPMPSGPPP 135
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 542 PXLPPPPXXXXPRXXXSXXPXXAXPVP---LPVXXHXPXXPXPPXXPSG 679
P PPPP S P P P LP P PP PSG
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +2
Query: 542 PXLPPPPXXXXPRXXXSXXPXXAXPVP---LPVXXHXPXXPXPPXXPSG 679
P PPPP S P P P LP P PP PSG
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 485
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +2
Query: 551 PPPPXXXXPRXXXSXXPXXAXPVPL-PVXXHXPXXPXPPXXPSGXPPIXXPTXPXAXXLP 727
PP P P P P P P P PSG PP P P LP
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLPTDLP 535
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = +2
Query: 500 PXXXXSXRAXPGXRPXLPPP--PXXXXPRXXXSXXPXXAXPVPLPVXXHXPXXPXPPXXP 673
P RA P PPP P PR P P P P P P P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE-PRNP 183
Query: 674 SGXPPIXXPTXP 709
PP P P
Sbjct: 184 PRTPPSPIPPPP 195
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 5/58 (8%)
Frame = +2
Query: 530 PGXRPXLPPPPXXXXPRXXXSXXPXXAX-----PVPLPVXXHXPXXPXPPXXPSGXPP 688
P P PPP P S P P PLP P PP P PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,439,458
Number of Sequences: 27780
Number of extensions: 92083
Number of successful extensions: 790
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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