Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_A06
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 253 5e-67
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 253 5e-67
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 253 5e-67
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 253 5e-67
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 131 4e-30
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 106 1e-22
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 52 4e-06
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 52 4e-06
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 5.5
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 5.5
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.5
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.5
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 5.5
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 5.5
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 5.5
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 5.5
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.5
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 5.5
AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophil... 31 7.3
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 253 bits (620), Expect = 5e-67
Identities = 115/143 (80%), Positives = 135/143 (94%)
Frame = +1
Query: 94 RXPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 273
+ P+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63
Query: 274 SMVDIRVTVKGGGXVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
+ VDIRV VKGGG VAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 454 PRRCEPKKFGGPGARARYQKSYR 522
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 253 bits (620), Expect = 5e-67
Identities = 115/143 (80%), Positives = 135/143 (94%)
Frame = +1
Query: 94 RXPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 273
+ P+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63
Query: 274 SMVDIRVTVKGGGXVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
+ VDIRV VKGGG VAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 454 PRRCEPKKFGGPGARARYQKSYR 522
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 253 bits (620), Expect = 5e-67
Identities = 115/143 (80%), Positives = 135/143 (94%)
Frame = +1
Query: 94 RXPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 273
+ P+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63
Query: 274 SMVDIRVTVKGGGXVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
+ VDIRV VKGGG VAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 454 PRRCEPKKFGGPGARARYQKSYR 522
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 253 bits (620), Expect = 5e-67
Identities = 115/143 (80%), Positives = 135/143 (94%)
Frame = +1
Query: 94 RXPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 273
+ P+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63
Query: 274 SMVDIRVTVKGGGXVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
+ VDIRV VKGGG VAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVAD
Sbjct: 64 AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123
Query: 454 PRRCEPKKFGGPGARARYQKSYR 522
PRRCE KKFGGPGARARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 131 bits (316), Expect = 4e-30
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 94 RXPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKF 273
+ P+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63
Query: 274 SMVDIRVTVKGGGXVAQVYAIRQAI 348
+ VDIRV VKGGG VAQ+Y Q +
Sbjct: 64 AGVDIRVRVKGGGHVAQIYGESQEL 88
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 365 PSTRNM*TKPQRRKSKTS*FNTIGVCW 445
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 106 bits (254), Expect = 1e-22
Identities = 56/108 (51%), Positives = 73/108 (67%)
Frame = +1
Query: 103 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 282
+Q+VQ+F K A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 283 DIRVTVKGGGXVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 426
DI V VKG G V Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 51.6 bits (118), Expect = 4e-06
Identities = 45/129 (34%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +1
Query: 124 GRKXTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 300
G++ TA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 301 KGGGXVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 480
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 382
Query: 481 GGPGARARY 507
G GAR ++
Sbjct: 383 GQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 51.6 bits (118), Expect = 4e-06
Identities = 45/129 (34%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +1
Query: 124 GRKXTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 300
G++ TA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 301 KGGGXVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 480
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 288
Query: 481 GGPGARARY 507
G GAR ++
Sbjct: 289 GQEGARRKF 297
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 322 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 453
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
>AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophila)
homolog-associated protein 3 protein.
Length = 979
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 279 GRHQSDSQGWWSCSTSLRYPTSYFKG 356
GRHQ+ S GWWS +L + + G
Sbjct: 251 GRHQAKSTGWWSSDDNLDSDSGFLAG 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,842,985
Number of Sequences: 237096
Number of extensions: 2040894
Number of successful extensions: 4541
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4539
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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