Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_A02
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                            106   2e-23
10_07_0174 + 13815478-13815903                                        106   3e-23
03_02_0943 + 12598616-12598789,12599790-12601250                       31   0.92 
06_01_0889 - 6807449-6809257                                           30   2.8  
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396...    30   2.8  

>03_01_0066 - 537729-538163
          Length = 144

 Score =  106 bits (255), Expect = 2e-23
 Identities = 54/98 (55%), Positives = 70/98 (71%)
 Frame = +1

Query: 184 TLXFXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNY 363
           TL F  NK     ++I+P K LRNK+AGF+THLMRR++   VRGIS+KLQEEERERR ++
Sbjct: 25  TLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDF 84

Query: 364 VPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
           VP+ SALE D I VD +T DML  L   ++ G+ + QP
Sbjct: 85  VPDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VRQP 121


>10_07_0174 + 13815478-13815903
          Length = 141

 Score =  106 bits (254), Expect = 3e-23
 Identities = 52/97 (53%), Positives = 68/97 (70%)
 Frame = +1

Query: 184 TLXFXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNY 363
           TL F  NK     ++I+P K LRNK+AGF THLMRR++   VRGIS+KLQEEERERR ++
Sbjct: 25  TLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDF 84

Query: 364 VPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 474
           VPE SALE + I VD +T +ML  L   ++ G++  Q
Sbjct: 85  VPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121


>03_02_0943 + 12598616-12598789,12599790-12601250
          Length = 544

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 19/60 (31%), Positives = 35/60 (58%)
 Frame = +1

Query: 262 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 441
           A +++HL+RR+        + K Q EE ++  +   + + LEHD+I  + +T D+LK L+
Sbjct: 41  AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96


>06_01_0889 - 6807449-6809257
          Length = 602

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 292 LRHSQVRGI-SIKLQEEERERRDNYVPEVSALEHDIIEVDPD 414
           LRH Q R I ++ +    R R + YVP+     HD+ E D +
Sbjct: 487 LRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKE 528


>03_06_0157 -
           32039020-32039175,32039267-32039338,32039478-32039602,
           32039678-32040559,32040623-32040692,32041248-32041739,
           32041985-32042044,32042541-32042618,32043322-32044344
          Length = 985

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -1

Query: 163 QEEDXAA*XDGXRTEHDPGRKGDSAAXDKKQREAKKSKXGKGRPRVXEAE 14
           ++ED     DG   E   G +G+    ++ Q E ++ K G+GRPR  +AE
Sbjct: 248 EKEDEVVAQDGDDVEEQKG-EGEEEMEEEVQVEVQE-KRGRGRPRKADAE 295


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,298,025
Number of Sequences: 37544
Number of extensions: 222928
Number of successful extensions: 556
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)