Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_A02
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 147 5e-35
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 147 5e-35
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 147 5e-35
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 147 5e-35
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 147 5e-35
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 147 5e-35
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 147 5e-35
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 147 5e-35
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 147 5e-35
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 147 5e-35
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 138 3e-32
M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 32 2.4
BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 32 2.4
BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 32 2.4
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 147 bits (356), Expect = 5e-35
Identities = 68/95 (71%), Positives = 80/95 (84%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 138 bits (333), Expect = 3e-32
Identities = 63/95 (66%), Positives = 76/95 (80%)
Frame = +1
Query: 193 FXXNKSXCXAIAIIPXKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 372
F NK C IAIIP K L NK AG+ THLM++++ VRGISIKLQEE RERRDNYVPE
Sbjct: 28 FHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEEVRERRDNYVPE 87
Query: 373 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 477
+SAL+ +IIEVDPDTK+MLK+LDF ++ LQ+TQP
Sbjct: 88 ISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
>M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box
protein.
Length = 709
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 163 QEEDXAA*XDGXRTEHDPGRKGDSAAXDKKQREAKKSKXGKGR 35
+EED A D + +GDS +KK+++ KK+K K R
Sbjct: 487 EEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDR 529
>BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein.
Length = 633
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 163 QEEDXAA*XDGXRTEHDPGRKGDSAAXDKKQREAKKSKXGKGR 35
+EED A D + +GDS +KK+++ KK+K K R
Sbjct: 487 EEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDR 529
>BC005116-1|AAH05116.1| 709|Homo sapiens structure specific
recognition protein 1 protein.
Length = 709
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 163 QEEDXAA*XDGXRTEHDPGRKGDSAAXDKKQREAKKSKXGKGR 35
+EED A D + +GDS +KK+++ KK+K K R
Sbjct: 487 EEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDR 529
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,098,555
Number of Sequences: 237096
Number of extensions: 1267114
Number of successful extensions: 3181
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3178
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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