Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P22
         (934 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    32   3.4  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    32   3.4  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    32   3.4  
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          32   3.4  
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    32   3.4  

>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = +2

Query: 704 RXVSPPPKGGITVIPXXQGXTXGXXPVEPXGXPXXPXXPXXRPXXXXPFFPXGPRPP 874
           R   PP +GG    P       G  P  P G    P  P   P    P    GP PP
Sbjct: 357 RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPP 413


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = +2

Query: 704 RXVSPPPKGGITVIPXXQGXTXGXXPVEPXGXPXXPXXPXXRPXXXXPFFPXGPRPP 874
           R   PP +GG    P       G  P  P G    P  P   P    P    GP PP
Sbjct: 357 RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPP 413


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = +2

Query: 704 RXVSPPPKGGITVIPXXQGXTXGXXPVEPXGXPXXPXXPXXRPXXXXPFFPXGPRPP 874
           R   PP +GG    P       G  P  P G    P  P   P    P    GP PP
Sbjct: 357 RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPP 413


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = +2

Query: 704 RXVSPPPKGGITVIPXXQGXTXGXXPVEPXGXPXXPXXPXXRPXXXXPFFPXGPRPP 874
           R   PP +GG    P       G  P  P G    P  P   P    P    GP PP
Sbjct: 369 RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPP 425


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = +2

Query: 704 RXVSPPPKGGITVIPXXQGXTXGXXPVEPXGXPXXPXXPXXRPXXXXPFFPXGPRPP 874
           R   PP +GG    P       G  P  P G    P  P   P    P    GP PP
Sbjct: 357 RGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPP 413


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,555,937
Number of Sequences: 237096
Number of extensions: 1267472
Number of successful extensions: 2373
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2336
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)