Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P17
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0252 + 1868670-1869200,1870167-1871120                           28   7.6  
11_01_0252 + 1934505-1935032,1936001-1936957                           28   7.6  
02_01_0381 - 2764331-2764342,2768966-2769907                           28   7.6  
09_04_0080 + 14393797-14393894,14395100-14395202,14395307-143954...    28   10.0 

>12_01_0252 + 1868670-1869200,1870167-1871120
          Length = 494

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 465 PPPPPXXGPXXGGGG 509
           PPPPP   P  GGGG
Sbjct: 66  PPPPPLNWPTAGGGG 80



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 508 PPPPXXGPXXGGGGG 464
           PPPP   P  GGGGG
Sbjct: 67  PPPPLNWPTAGGGGG 81


>11_01_0252 + 1934505-1935032,1936001-1936957
          Length = 494

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 465 PPPPPXXGPXXGGGG 509
           PPPPP   P  GGGG
Sbjct: 65  PPPPPLNWPMAGGGG 79



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 508 PPPPXXGPXXGGGGG 464
           PPPP   P  GGGGG
Sbjct: 66  PPPPLNWPMAGGGGG 80


>02_01_0381 - 2764331-2764342,2768966-2769907
          Length = 317

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 465 PPPPPXXGPXXGGGG 509
           PPPPP   P  GGGG
Sbjct: 65  PPPPPPNQPSAGGGG 79



 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 508 PPPPXXGPXXGGGGG 464
           PPPP   P  GGGGG
Sbjct: 66  PPPPPNQPSAGGGGG 80


>09_04_0080 +
           14393797-14393894,14395100-14395202,14395307-14395427,
           14396208-14396287,14396702-14396878,14396992-14397215,
           14397881-14397887,14398807-14398888,14399188-14399384
          Length = 362

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 508 PPPPXXGPXXGGGGG 464
           PPPP  G   GGGGG
Sbjct: 344 PPPPPAGDEGGGGGG 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,539,404
Number of Sequences: 37544
Number of extensions: 218965
Number of successful extensions: 983
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)