Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P16
         (887 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P31420 Cluster: Ommochrome-binding protein precursor; n...   149   1e-34
UniRef50_Q9NDA4 Cluster: Diapause-associated protein; n=7; Ostri...   108   2e-22
UniRef50_Q73KM9 Cluster: Putative uncharacterized protein; n=1; ...    34   5.6  
UniRef50_Q8GGP2 Cluster: Polyketide synthase; n=1; Streptomyces ...    34   5.6  
UniRef50_Q3ZVJ3 Cluster: Adhesion related protein, transmembrane...    33   9.7  

>UniRef50_P31420 Cluster: Ommochrome-binding protein precursor; n=1;
           Manduca sexta|Rep: Ommochrome-binding protein precursor
           - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 274

 Score =  149 bits (360), Expect = 1e-34
 Identities = 84/197 (42%), Positives = 109/197 (55%)
 Frame = +1

Query: 142 VLKAXVXXPFQLVVXXQTNTLXFQLLFFVPRXKRFLNPFT*TLTLKXSAXXPASIRA*LL 321
           VLK  +   +QL    Q NTL F     V   K  L      L  K              
Sbjct: 34  VLKDNIHQAYQLSFDPQQNTLFFSYSDEVDS-KTVLKMGYLNLATKSFGEISGVKDGMAT 92

Query: 322 HMXXANTLCTLGGXXGIYTFDYTTKSAKNLRVTSYSIWQMFHCPVHGLYFTTFNPDEKAF 501
            +   N +  LGG  GIYT+DY TKSAKN+ VTS SIWQMF+CP+HGL+FTT   DEK +
Sbjct: 93  AVDTTNHIVYLGGKDGIYTYDYATKSAKNIGVTSLSIWQMFYCPIHGLFFTT--SDEKPY 150

Query: 502 VYSYGQVGPVPELTDIKTRLIAVGQKHDIYFANSAGIFVLKTIDGVLYXIXLXXFTVNGF 681
           V+  GQV  + E +  KTR++AVG+ HD++FANS+GIF+       +  I L  + VN F
Sbjct: 151 VFKDGQVNQIVEASSSKTRVMAVGEHHDVFFANSSGIFLFNHHTNKV--IDLGDYNVNAF 208

Query: 682 ASDXNGKLYFSTPX*YF 732
             D  GKLYFS+P  ++
Sbjct: 209 TKDSKGKLYFSSPVGFY 225


>UniRef50_Q9NDA4 Cluster: Diapause-associated protein; n=7;
           Ostrinia|Rep: Diapause-associated protein - Ostrinia
           furnacalis (Asian corn borer)
          Length = 291

 Score =  108 bits (259), Expect = 2e-22
 Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 6/198 (3%)
 Frame = +1

Query: 142 VLKAXVXXPFQLVVXXQTNTLXFQLLFFVPRXKRFLNPFT*TLTLKXSAXXPASIRA*LL 321
           VL   V  P+QL +   TNTL F       R +   +    +  +        +I    +
Sbjct: 37  VLMKDVEKPYQLGLDRDTNTLFFSYTVDEQRRREGDDNAFRSAYVNLKDGTSGTIPG--V 94

Query: 322 HMXXANTLCT------LGGXXGIYTFDYTTKSAKNLRVTSYSIWQMFHCPVHGLYFTTFN 483
           H   AN   T      +GG  G++ FDY TK+A NL +T  +IWQMF+   +GLYFTT+ 
Sbjct: 95  HNGFANAYDTQQKIVYIGGDTGVHKFDYRTKTASNLNITESNIWQMFY--KNGLYFTTY- 151

Query: 484 PDEKAFVYSYGQVGPVPELTDIKTRLIAVGQKHDIYFANSAGIFVLKTIDGVLYXIXLXX 663
           PD+KAFVY   ++  VPEL D+K  L+A+ +   I ++    +   +T +G +Y   L  
Sbjct: 152 PDQKAFVYKNDRLRLVPELMDVKATLVALEKGDSIVYSLDGDL--RRTSEGRVY--ELGS 207

Query: 664 FTVNGFASDXNGKLYFST 717
           + VNGF +D NG LYFST
Sbjct: 208 YNVNGFNTDVNGDLYFST 225


>UniRef50_Q73KM9 Cluster: Putative uncharacterized protein; n=1;
           Treponema denticola|Rep: Putative uncharacterized
           protein - Treponema denticola
          Length = 515

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 460 GLYFTTFNPD-EKAFVYSYGQVGPVPELTDIKTRLIAVGQKH 582
           GL FT  N   EKA  YSYG  GP   ++DI   ++  G K+
Sbjct: 102 GLNFTFINDQKEKALFYSYGIKGPASGMSDIPIFIMKFGDKN 143


>UniRef50_Q8GGP2 Cluster: Polyketide synthase; n=1; Streptomyces
            atroolivaceus|Rep: Polyketide synthase - Streptomyces
            atroolivaceus
          Length = 7349

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +1

Query: 466  YFTTFNPDEKAFVYSYGQVGPVPELTDIKTRLIAVGQKHDIYFANSAGIFVLKTIDGVLY 645
            YF     D+    +SY  VGP  E+  + T  +  GQ H +  AN   +  L+ +DGV +
Sbjct: 6300 YFNFSVRDDAMLTWSY--VGPTEEMPALATEFVRYGQAHGL-AANIVSLIRLEEVDGVRF 6356


>UniRef50_Q3ZVJ3 Cluster: Adhesion related protein, transmembrane;
           n=7; Spiroplasma citri|Rep: Adhesion related protein,
           transmembrane - Spiroplasma citri
          Length = 861

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
 Frame = +1

Query: 478 FNPDEKAFVYSYGQVGPVP-ELTDIKTRLIAVGQKHDIYFANSAGIFVLKTIDGVLYXIX 654
           F  D  A+  S G   P      ++    IAV  K +IYF     +FVLK  +     I 
Sbjct: 187 FGTDSGAYKLSAGSNTPTKINGINVYVNTIAVDSKDNIYFVTLNCVFVLKQGETTATKID 246

Query: 655 LXXFTVNGFASDXNGKLYFST 717
                VN  A D    +YFS+
Sbjct: 247 GIDGYVNTIAVDSKDNIYFSS 267


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,183,547
Number of Sequences: 1657284
Number of extensions: 9660806
Number of successful extensions: 20186
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20176
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)