Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P15
         (1312 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1EP07 Cluster: Putative uncharacterized protein; n=1; ...    36   2.3  
UniRef50_Q8GFF2 Cluster: Putative uncharacterized protein; n=1; ...    35   5.4  
UniRef50_UPI0000F2E949 Cluster: PREDICTED: hypothetical protein;...    34   7.1  
UniRef50_UPI0000DA3BE5 Cluster: PREDICTED: hypothetical protein;...    34   7.1  
UniRef50_Q1HMI6 Cluster: Formin A; n=4; Trypanosoma cruzi|Rep: F...    34   7.1  

>UniRef50_Q1EP07 Cluster: Putative uncharacterized protein; n=1;
           Musa acuminata|Rep: Putative uncharacterized protein -
           Musa acuminata (Banana)
          Length = 390

 Score = 35.9 bits (79), Expect = 2.3
 Identities = 30/121 (24%), Positives = 34/121 (28%), Gaps = 3/121 (2%)
 Frame = +2

Query: 578 PXXAPPPXRDGXAGQXRPXPRGXGXXRQXSSRXPXXPAXGPXPXAXDRXDXPXXASXPXP 757
           P  APPP          P P G           P  PA  P P        P     P P
Sbjct: 164 PEPAPPPPEPAPPTPEPPPPPGPEPPPPPGPEPPPPPAPEPPPPPAPEPPPPPPPK-PDP 222

Query: 758 RGPPQXXXXXPLXKXRXRL-XXAXHERXVXXPPR--AXRRAGTXXXTXTXPPPATXXXXS 928
             PP      P+   R  +     H+      PR  + R       T   PPPA      
Sbjct: 223 TPPPDVVVKAPMWAFRTPVWPVCCHQPCPCYEPRYGSCRCCSCGLMTDEPPPPAMYYGGP 282

Query: 929 P 931
           P
Sbjct: 283 P 283


>UniRef50_Q8GFF2 Cluster: Putative uncharacterized protein; n=1;
           Streptomyces aureofaciens|Rep: Putative uncharacterized
           protein - Streptomyces aureofaciens
          Length = 579

 Score = 34.7 bits (76), Expect = 5.4
 Identities = 22/67 (32%), Positives = 25/67 (37%)
 Frame = +2

Query: 563 RTXTXPXXAPPPXRDGXAGQXRPXPRGXGXXRQXSSRXPXXPAXGPXPXAXDRXDXPXXA 742
           R    P  APPP R       R  P      R  S+R    P   P P A  R + P  A
Sbjct: 494 RAPASPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATPRPRPPPRPSAAARPEPPPRA 553

Query: 743 SXPXPRG 763
           + P P G
Sbjct: 554 A-PGPSG 559


>UniRef50_UPI0000F2E949 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 235

 Score = 34.3 bits (75), Expect = 7.1
 Identities = 35/142 (24%), Positives = 43/142 (30%)
 Frame = +2

Query: 521 RXRXHXXXTPXRXVRTXTXPXXAPPPXRDGXAGQXRPXPRGXGXXRQXSSRXPXXPAXGP 700
           R R H   +P   +     P  A PP R    G+     RG       ++      A GP
Sbjct: 64  RRRSHCRSSPPPGLTCPAGPAPAQPPPRAPCGGRAAGAARGAELGTSQAASAAGPRAPGP 123

Query: 701 XPXAXDRXDXPXXASXPXPRGPPQXXXXXPLXKXRXRLXXAXHERXVXXPPRAXRRAGTX 880
            P        P   S P P  P       P  K       A   R     P    +AG+ 
Sbjct: 124 RPVPGCPAQPP---STPDPEVPSPRVPGLPALKAPAPFVRAPFPR---SGPAGWGQAGS- 176

Query: 881 XXTXTXPPPATXXXXSPGAGTR 946
                 PPP       PG GT+
Sbjct: 177 ----REPPPRAALPVPPGLGTQ 194


>UniRef50_UPI0000DA3BE5 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 105

 Score = 34.3 bits (75), Expect = 7.1
 Identities = 22/64 (34%), Positives = 26/64 (40%)
 Frame = +2

Query: 578 PXXAPPPXRDGXAGQXRPXPRGXGXXRQXSSRXPXXPAXGPXPXAXDRXDXPXXASXPXP 757
           P   PPP R G   + R  PRG    R+ S + P  PA         R      A+ P P
Sbjct: 45  PPDPPPPERKGPPARHRVPPRG---GRRRSPKVPRPPATAASRTPATRAS--SAAATPPP 99

Query: 758 RGPP 769
           R PP
Sbjct: 100 RQPP 103


>UniRef50_Q1HMI6 Cluster: Formin A; n=4; Trypanosoma cruzi|Rep:
           Formin A - Trypanosoma cruzi strain CL Brener
          Length = 1178

 Score = 34.3 bits (75), Expect = 7.1
 Identities = 34/135 (25%), Positives = 43/135 (31%)
 Frame = +2

Query: 548 PXRXVRTXTXPXXAPPPXRDGXAGQXRPXPRGXGXXRQXSSRXPXXPAXGPXPXAXDRXD 727
           P    ++   P   PPP     +G   P P   G   + S   P  P   P P A  +  
Sbjct: 561 PGAGAKSGLPPPPPPPPGAGAKSGLPPPPPPPPGAGAK-SGLPPPPP---PPPGAGAKSG 616

Query: 728 XPXXASXPXPRGPPQXXXXXPLXKXRXRLXXAXHERXVXXPPRAXRRAGTXXXTXTXPPP 907
            P     P P  PP       L         A  +  +  PP     AG      + PPP
Sbjct: 617 LP-----PPPPPPPGAGAKSGLPPPPPPPPGAGAKSGLPPPPPPPPGAGAKSGL-SPPPP 670

Query: 908 ATXXXXSPGAGTRXG 952
                  PGAG + G
Sbjct: 671 PPPPPPPPGAGAKSG 685


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.313    0.127    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,984,194
Number of Sequences: 1657284
Number of extensions: 5206046
Number of successful extensions: 6961
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6829
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 134843940747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)