Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P14
         (899 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P55796 Cluster: Lebocin-3 precursor; n=4; Obtectomera|R...    85   3e-15
UniRef50_UPI0000D9D60E Cluster: PREDICTED: hypothetical protein;...    34   5.7  
UniRef50_Q01EY9 Cluster: Glutamyl-tRNA; n=1; Ostreococcus tauri|...    33   7.5  
UniRef50_Q2RZZ0 Cluster: Mercuric reductase; n=1; Salinibacter r...    33   9.9  
UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n...    33   9.9  

>UniRef50_P55796 Cluster: Lebocin-3 precursor; n=4; Obtectomera|Rep:
           Lebocin-3 precursor - Bombyx mori (Silk moth)
          Length = 179

 Score = 84.6 bits (200), Expect = 3e-15
 Identities = 57/114 (50%), Positives = 64/114 (56%)
 Frame = +3

Query: 300 KIXAVQLXPNRRXVRSVTNPDKXRGVH*NIHIITVEYWNLNQAESKXHRNTREXAXFCTL 479
           KI  VQL PNRR VRSVTNP+       + H  TV+       ES  HRNTR+   F   
Sbjct: 72  KIDDVQLDPNRRYVRSVTNPENNEASIEHSHH-TVDIGLDQPIES--HRNTRDLR-FLYP 127

Query: 480 EGKTACFQRFLRFNPKPIYIDMGKPLXTNMRRRIKKELRXYNEHFLIPRDIFQE 641
            GK         FNPKPIYIDMG     +     ++ELR YNEHFLIPRDIFQE
Sbjct: 128 RGKLPV-PTLPPFNPKPIYIDMGNRYRRHASED-QEELRQYNEHFLIPRDIFQE 179


>UniRef50_UPI0000D9D60E Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 777

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -3

Query: 294 GRSGGDAGLGARGTLAPXDSQSGAG 220
           GR GGDAG G++ TL P  + +GAG
Sbjct: 727 GRQGGDAGAGSKRTLFPRAASAGAG 751


>UniRef50_Q01EY9 Cluster: Glutamyl-tRNA; n=1; Ostreococcus
           tauri|Rep: Glutamyl-tRNA - Ostreococcus tauri
          Length = 199

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 27/72 (37%), Positives = 31/72 (43%)
 Frame = -2

Query: 286 RRGCGTWRTRNIGTXRQPERXRASVXHGNXGAGAXXXGAXXAAGETDGHEARSKEQATKN 107
           RR  G+ RTR     R   R RA   HG  G G    G   A     G + R +E  T  
Sbjct: 119 RRTLGSSRTRKGRMGRGTHRHRAGSAHGARGRGV--RGRTEAHRAIFGRKRRQREH-TAR 175

Query: 106 ETKDXKRRQGGG 71
            T+D  R QGGG
Sbjct: 176 RTQDV-RDQGGG 186


>UniRef50_Q2RZZ0 Cluster: Mercuric reductase; n=1; Salinibacter
           ruber DSM 13855|Rep: Mercuric reductase - Salinibacter
           ruber (strain DSM 13855)
          Length = 574

 Score = 33.1 bits (72), Expect = 9.9
 Identities = 19/45 (42%), Positives = 21/45 (46%)
 Frame = -3

Query: 267 GARGTLAPXDSQSGAGPAWXTGTXERARXXRGPXXRREKPTGTKH 133
           G+RG L P    SG  PAW  G   R R   GP    E P+ T H
Sbjct: 33  GSRG-LRPSFC-SGRSPAWPVGRVTRGRVSGGPVVTTEAPSSTVH 75


>UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n=1;
           Trichomonas vaginalis G3|Rep: CPSF A subunit region
           family protein - Trichomonas vaginalis G3
          Length = 1142

 Score = 33.1 bits (72), Expect = 9.9
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -1

Query: 530 WLGVKPEEALETGSFPFEGTKXRXFPCVTVALRFGLVQVPIFNCYDVN 387
           W   K  E L T S P E ++ + F   TVAL  G  +VP F C +V+
Sbjct: 145 WTVTKNNENLPTVSAPLENSRNKTFVYSTVALDVG-YEVPKFACIEVH 191


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,479,304
Number of Sequences: 1657284
Number of extensions: 11380200
Number of successful extensions: 26660
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26622
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)