Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P14
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719...    31   1.6  
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861     30   2.2  
08_02_0313 - 15659600-15659716,15660376-15660495,15660581-156606...    30   2.2  
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547...    29   5.0  
11_06_0070 + 19802893-19803026,19803054-19803816                       28   8.8  
07_01_1077 - 9687394-9687515,9696615-9696733,9696815-9697104,969...    28   8.8  

>09_02_0318 -
           7191763-7191879,7192375-7192494,7192568-7192666,
           7192846-7192957,7193058-7193161,7193341-7193520,
           7193611-7193880,7194364-7194660,7195283-7195477
          Length = 497

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 473 TKXRXFPCVTVALRFGLVQVPIFNCYDVNVS 381
           TK R  P V +   + L+ +P+ NC + NVS
Sbjct: 84  TKKRAKPAVPLGANYRLIDIPVSNCLNSNVS 114


>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
          Length = 158

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
 Frame = -2

Query: 298 RRKKRRGCGTWRTRNIGTXRQPERX--RASVXHGNXGAGAXXX---GAXXAAG----ETD 146
           RR++RRG G    R  G  ++ E    R +      GAG       G   AAG    E +
Sbjct: 7   RRRRRRGGGR---RAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEEEE 63

Query: 145 GHEARSKEQATKNETKDXKRRQGGGSXETPESKXEXXARRXXA 17
               ++ E+A +   K  KRR+GGG       K E  A R  A
Sbjct: 64  AGRRKAGEEARRGAGK-RKRRRGGGRRAAGRRKEEEEAGRRKA 105


>08_02_0313 -
           15659600-15659716,15660376-15660495,15660581-15660679,
           15660802-15660913,15661025-15661128,15661316-15661495,
           15661612-15661881,15662529-15662825,15663432-15663677
          Length = 514

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 473 TKXRXFPCVTVALRFGLVQVPIFNCYDVNVS 381
           TK R  P V +   + L+ +P+ NC + N+S
Sbjct: 101 TKKRAKPAVPLGANYRLIDIPVSNCLNSNIS 131


>09_06_0364 +
           22554082-22554225,22554306-22554520,22554671-22554752,
           22554976-22555371,22555553-22556293,22556420-22556551,
           22556981-22557367
          Length = 698

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/80 (23%), Positives = 30/80 (37%)
 Frame = -2

Query: 280 GCGTWRTRNIGTXRQPERXRASVXHGNXGAGAXXXGAXXAAGETDGHEARSKEQATKNET 101
           G   W T + G   Q      S  + N G G+    +  +  + DGH    KE A  + +
Sbjct: 478 GISAWPT-DAGCTSQAGSVNESWDNANEGTGSHVPSSSGSPKKLDGHCKEIKESAAASGS 536

Query: 100 KDXKRRQGGGSXETPESKXE 41
            D +  +   +   P S  E
Sbjct: 537 DDDEEEEEEAADVPPNSGSE 556


>11_06_0070 + 19802893-19803026,19803054-19803816
          Length = 298

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 11/114 (9%)
 Frame = -2

Query: 379 WTP-----RXLSGLVTLRTXLRFGXSCTAXIFRRKK--RRGC-GTWRTRNIGTXRQPERX 224
           WTP     R  SG   +   +R         +RR+   R+G  G WR  + G      R 
Sbjct: 114 WTPTRRPLRRASGEEEVMPGMRAASRSRGRWWRRRPALRQGDRGGWRWYSGGNATGRRRE 173

Query: 223 RASVXHGNXGAGAXXXGAXXAAGETDGHEAR---SKEQATKNETKDXKRRQGGG 71
           RAS  H          G    AGE DG   R    + +A  +  +  KRR   G
Sbjct: 174 RASGGHRAKRRAGRGRGGGCDAGEGDGTAGRRTVEEGEAAGSARRGGKRRATAG 227


>07_01_1077 -
           9687394-9687515,9696615-9696733,9696815-9697104,
           9697191-9698075
          Length = 471

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 584 LDPPTHVRR*RFSHINIYWLGVKPEEALETGSFPFEGTKXRXFPCVTVALRFGL 423
           L+P + V    F H+   +LG+KP  AL    F  +    +  PCV    RF L
Sbjct: 88  LNPNSIVHIANFVHVCEAFLGIKPHFALFRRIFFLKPQPNKSKPCVVGGARFQL 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,696,432
Number of Sequences: 37544
Number of extensions: 329572
Number of successful extensions: 879
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)