Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_P14
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040529-1|AAH40529.1| 231|Homo sapiens PCTK3 protein protein. 33 1.1
AM083310-1|CAL07456.1| 101|Homo sapiens immunoglobulin heavy ch... 32 3.3
AM081237-1|CAL05383.1| 99|Homo sapiens immunoglobulin heavy ch... 32 3.3
AM081808-1|CAL05954.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.7
AM079874-1|CAL04020.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.5
BC132928-1|AAI32929.1| 270|Homo sapiens hypothetical gene suppo... 30 10.0
BC132926-1|AAI32927.1| 270|Homo sapiens hypothetical gene suppo... 30 10.0
AM080205-1|CAL04351.1| 100|Homo sapiens immunoglobulin heavy ch... 30 10.0
AK123485-1|BAC85625.1| 270|Homo sapiens protein ( Homo sapiens ... 30 10.0
>BC040529-1|AAH40529.1| 231|Homo sapiens PCTK3 protein protein.
Length = 231
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 170 GPRXXRARSXVPVXHAGPAP--LWL 238
GPR + +S VPV HAGP P LWL
Sbjct: 169 GPRERQPKSQVPVPHAGPTPQLLWL 193
>AM083310-1|CAL07456.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 472 VPSKGKLPVSNASSGLTPSQYILIWENRXRRT---CVGGSRKNCGNIMSTF*FRGIFSKN 642
VP G L +S A+SG T ++Y + W R V + GNI+ RG F+ +
Sbjct: 15 VPPGGSLRLSCAASGFTFNEYAMSWVRRAPGKGLEWVSVISGSGGNILYADSVRGRFTIS 74
Query: 643 RESSRN 660
R++S+N
Sbjct: 75 RDNSKN 80
>AM081237-1|CAL05383.1| 99|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 99
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 469 FVPSKGKLPVSNASSGLTPSQYILIWENRXRRTCVGGSRKNCGNIMSTF---*FRGIFSK 639
FV + G L +S A+SGLT + Y +IW R + G G+ T+ +G F+
Sbjct: 14 FVQAGGSLRLSCAASGLTFNTYAMIWVRRAPGKGLEGVSVISGSGDGTYYSDSVKGRFTI 73
Query: 640 NRESSRN 660
+R++S+N
Sbjct: 74 SRDNSKN 80
>AM081808-1|CAL05954.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 484 GKLPVSNASSGLTPSQYILIWENRXRRT---CVGGSRKNCGNIMSTF*FRGIFSKNRESS 654
G L +S A+SG T S Y + W + CV G + G+I +G F+ +R++S
Sbjct: 19 GSLRLSCAASGFTFSSYAMSWVRQAPGKGLECVSGISGSGGSIYYADSVKGRFTISRDNS 78
Query: 655 RN 660
+N
Sbjct: 79 KN 80
>AM079874-1|CAL04020.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 484 GKLPVSNASSGLTPSQYILIWENRXRRT---CVGGSRKNCGNIMSTF*FRGIFSKNRESS 654
G L +S A SGLT S+Y + W + T V G + G+ +G F+ +R++S
Sbjct: 19 GSLRLSCAVSGLTFSKYAMSWVRQGPGTGLEWVSGISTSGGSTYYADSVKGRFTISRDNS 78
Query: 655 RNKRF 669
+NK +
Sbjct: 79 KNKLY 83
>BC132928-1|AAI32929.1| 270|Homo sapiens hypothetical gene
supported by AK123485 protein.
Length = 270
Score = 30.3 bits (65), Expect = 10.0
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -3
Query: 294 GRSGGDAGLGARGT--LAPXDSQSGAGPAW-XTGTXERARXXRGP 169
GR+GG+ G G RGT +P GA P W G R R P
Sbjct: 162 GRAGGEGGRGGRGTAGCSPPWGIRGAEPRWRPRGPGSRERTAEWP 206
>BC132926-1|AAI32927.1| 270|Homo sapiens hypothetical gene
supported by AK123485 protein.
Length = 270
Score = 30.3 bits (65), Expect = 10.0
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -3
Query: 294 GRSGGDAGLGARGT--LAPXDSQSGAGPAW-XTGTXERARXXRGP 169
GR+GG+ G G RGT +P GA P W G R R P
Sbjct: 162 GRAGGEGGRGGRGTAGCSPPWGIRGAEPRWRPRGPGSRERTAEWP 206
>AM080205-1|CAL04351.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 30.3 bits (65), Expect = 10.0
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 484 GKLPVSNASSGLTPSQYILIWENRXRRT---CVGGSRKNCGNIMSTF*FRGIFSKNRESS 654
G L +S A+SG T S Y + W + CV + GNI +G F+ +R++S
Sbjct: 19 GSLRLSCAASGFTFSTYAMSWVRQAPGKGLECVSTLGASGGNIFYADSVKGRFTVSRDNS 78
Query: 655 RN 660
+N
Sbjct: 79 KN 80
>AK123485-1|BAC85625.1| 270|Homo sapiens protein ( Homo sapiens
cDNA FLJ41491 fis, clone BRTHA2004978. ).
Length = 270
Score = 30.3 bits (65), Expect = 10.0
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -3
Query: 294 GRSGGDAGLGARGT--LAPXDSQSGAGPAW-XTGTXERARXXRGP 169
GR+GG+ G G RGT +P GA P W G R R P
Sbjct: 162 GRAGGEGGRGGRGTAGCSPPWGIRGAEPRWRPRGPGSRERTAEWP 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,264,658
Number of Sequences: 237096
Number of extensions: 1677364
Number of successful extensions: 3852
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3851
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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