Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P12
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0900 + 28627221-28629536                                         31   0.95 
12_02_0640 - 21447470-21448309                                         29   6.7  
12_02_0635 - 21430245-21431156                                         29   6.7  

>03_05_0900 + 28627221-28629536
          Length = 771

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +1

Query: 718 PPXKLPRXPPXX-PTLXAXPDTXSAXSPXRXXVAXFSXPPPV 840
           PP  LPR      P+L A PD  SA    R  +   S PPPV
Sbjct: 149 PPDLLPRLAAAAIPSLIASPDPISAVPAIRRLLPIASHPPPV 190


>12_02_0640 - 21447470-21448309
          Length = 279

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
 Frame = +1

Query: 631 PPPXTSITKIXAQXRG-GETPTGL*RYQXFPPXKLPRXPPXXPTLXAXPDTXSA 789
           PPP T   K  +  R    TP    R    PP   PR PP  P     P T  A
Sbjct: 192 PPPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPGSPKKPATPGA 245


>12_02_0635 - 21430245-21431156
          Length = 303

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
 Frame = +1

Query: 631 PPPXTSITKIXAQXRG-GETPTGL*RYQXFPPXKLPRXPPXXPTLXAXPDTXSA 789
           PPP T   K  +  R    TP    R    PP   PR PP  P     P T  A
Sbjct: 189 PPPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPGSPKKPATPGA 242


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,885,391
Number of Sequences: 37544
Number of extensions: 181882
Number of successful extensions: 352
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)