Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P12
         (903 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P...    31   2.9  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   6.6  
BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p pro...    29   6.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   6.6  

>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
            isoform A protein.
          Length = 1853

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
 Frame = +1

Query: 718  PPXKLPRXPPXXPTLXAXPDTXSA-----XSPXRXXVAXFSXPPPVGYLXFG 858
            PP + P  PP  P + + P+  SA       P    +  F  PPP   L FG
Sbjct: 1798 PPPRFPLPPPPFPFIGSLPEADSAVIAILPIPPPPPIPAFPRPPPRPPLPFG 1849


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 393 ESANXRGXAVCXLGXLPXPRSLTXCXRSFGCG 488
           ES      +VC  G LP P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p
           protein.
          Length = 1273

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 742 PPXXPTLXAXPDTXSAXSPXRXXVAXFSXPPPVGYLXFG 858
           PP  P + A P   SA  P     A  + PPP G+   G
Sbjct: 696 PPPPPPMPASPTASSAAPPPPPPPAPPAPPPPPGFSPLG 734


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 393 ESANXRGXAVCXLGXLPXPRSLTXCXRSFGCG 488
           ES      +VC  G LP P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,563,943
Number of Sequences: 53049
Number of extensions: 279179
Number of successful extensions: 443
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)