Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P09
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0066 + 27453611-27453627,27454729-27454872,27455998-274566...    31   1.1  
03_02_0178 + 6195402-6199158,6199438-6200003                           30   2.7  
11_01_0551 + 4361640-4363386,4363443-4363687                           29   6.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.1  

>05_07_0066 +
           27453611-27453627,27454729-27454872,27455998-27456690,
           27457700-27458111,27458220-27458297,27458938-27458953,
           27459038-27459192
          Length = 504

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 730 AXAVGISVRCRSFAPSWAVCPNPPVQPDRWALIRVT 837
           A A G+ ++ RS AP+  + P P   P R + +RVT
Sbjct: 224 AAAAGVKIQRRSSAPAEKLMPPPSTTPSRSSTLRVT 259


>03_02_0178 + 6195402-6199158,6199438-6200003
          Length = 1440

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 571 RRSSQRWRNPTGL*RYQAFPPGSSLVRSPXSDPCRLP 681
           RR S  WR+  GL  Y+A P  S    SP + P RLP
Sbjct: 113 RRQSGGWRDSEGLDGYRAAPRRSG--ASPPTPPLRLP 147


>11_01_0551 + 4361640-4363386,4363443-4363687
          Length = 663

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 524 WRFSIGSAPLTSITKID--AQVRGGETRQDYKDTRRF-PLEAPSCALLXPTPAAYRIPVR 694
           WR    SA    I  +D  A ++  +T   Y+   R  P   P+C  L P+P  YR P+R
Sbjct: 341 WRLCNTSAGADYIPCLDNEAAIKKLKTTAHYEHRERHCPASPPTC--LVPSPEGYRDPIR 398


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 353 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 508
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 302 NESAN---ARGEAVCVLGALPLPRSLTRCAR 385
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,286,339
Number of Sequences: 37544
Number of extensions: 483177
Number of successful extensions: 1518
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)