Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_P08
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 7.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 7.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +3
Query: 144 GPPPXPPXXG--PPPXPPXXXXG 206
GPPP PP G PPP PP G
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +3
Query: 144 GPPPXPPXXG--PPPXPPXXXXG 206
GPPP PP G PPP PP G
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +3
Query: 144 GPPPXPPXXG--PPPXPPXXXXG 206
GPPP PP G PPP PP G
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGG 362
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 147 PPPXPPXXGPPPXPPXXXXG 206
PPP PP G PP PP G
Sbjct: 579 PPPPPPMLGGPPPPPPPPGG 598
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 147 PPPXPPXXGPPPXPP 191
PPP PP PPP PP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 147 PPPXPPXXGPPPXPP 191
PPP PP PPP PP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 147 PPPXPPXXGPPPXPP 191
PPP PP PPP PP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 147 PPPXPPXXGPPPXPP 191
PPP PP PPP PP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 147 PPPXPPXXGPPPXPP 191
PPP PP PPP PP
Sbjct: 66 PPPPPPPMCPPPPPP 80
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 147 PPPXPPXXGPPPXPP 191
PPP PP PPP PP
Sbjct: 73 PPPPPPMPCPPPPPP 87
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 144 GPPPXPPXXGPPPXPP 191
G PP PP G PP PP
Sbjct: 103 GIPPPPPMFGAPPPPP 118
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 144 GPPPXPPXXGPPPXPP 191
GPPP PP PP PP
Sbjct: 146 GPPPKPPCQKCPPGPP 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,647,201
Number of Sequences: 27780
Number of extensions: 126564
Number of successful extensions: 1077
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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