Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P07
         (944 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    26   0.43 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.00 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.0  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 0.43
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 892 GGGGRXXGGXAXXGXXGGGXXXXGXXGGXGGG 797
           GG G    G    G  GG        GG GGG
Sbjct: 20  GGPGSSSAGGVVTGASGGSIVVGANNGGGGGG 51


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 1.00
 Identities = 12/38 (31%), Positives = 12/38 (31%)
 Frame = +2

Query: 815 PXPXXPXPPPXPXXXXRPPXXPPPPPGXPXXXPHXXXP 928
           P P     P  P     P     PPPG P   P    P
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +2

Query: 800 PPPSSPXPXXPXPPPXPXXXXRPPXXPPPPPGXP 901
           P P  P P     P       RP   P P P  P
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 140



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +2

Query: 800 PPPSSPXPXXPXPPPXPXXXXRPPXXPPPPPGXP 901
           P P  P P     P       RP   P P P  P
Sbjct: 133 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 350 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 192
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 350 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 192
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 350 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 192
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,308
Number of Sequences: 438
Number of extensions: 7972
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)