Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P05
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   189   2e-48
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   188   7e-48
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   187   1e-47
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   184   7e-47

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  189 bits (461), Expect = 2e-48
 Identities = 84/144 (58%), Positives = 104/144 (72%)
 Frame = +3

Query: 156 FIMVKPDGVXRGLVGXXIERFEKXGFXLVGLKFVWPSEXLLQQHYSDLASRPFFPGLVKY 335
           FI +KPDGV RGL+   + RFE+ GF LV +K V PS+   Q+HY DL  RPFF GL  +
Sbjct: 49  FIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPFFNGLCDF 108

Query: 336 MSSGPVVPMVWEGLNVVKTGRXMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAK 515
           +SSGPV+ MVWEG  V+K GR ++GAT+P  S+PGTIRGDL + VGRNIIHGSD  E+AK
Sbjct: 109 LSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAK 168

Query: 516 KEIGLWFTDXEVVGWTPANENWVY 587
            EIGLWF   E+V +T   E W+Y
Sbjct: 169 AEIGLWFEPRELVSYTSNEEKWIY 192


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  188 bits (457), Expect = 7e-48
 Identities = 84/145 (57%), Positives = 106/145 (73%)
 Frame = +3

Query: 156 FIMVKPDGVXRGLVGXXIERFEKXGFXLVGLKFVWPSEXLLQQHYSDLASRPFFPGLVKY 335
           FIM+KPDGV RGL+G  I RFEK GF L G+KF+       QQHY+DL+ +PFFPGLV+Y
Sbjct: 5   FIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEY 64

Query: 336 MSSGPVVPMVWEGLNVVKTGRXMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAK 515
           + SGPVV MVWEG +VV TGR ++GAT P ++ PGTIR D  ++VGRN+IHGSDSV++ K
Sbjct: 65  IISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGK 124

Query: 516 KEIGLWFTDXEVVGWTPANENWVYE 590
           KEI LWF +  +  W      W+YE
Sbjct: 125 KEIALWFPEG-LAEWRSNLHPWIYE 148


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  187 bits (455), Expect = 1e-47
 Identities = 82/145 (56%), Positives = 106/145 (73%)
 Frame = +3

Query: 156 FIMVKPDGVXRGLVGXXIERFEKXGFXLVGLKFVWPSEXLLQQHYSDLASRPFFPGLVKY 335
           FIM+KPDGV RGL+G  I RFEK GF L  +K +   +   ++HY+DL+S+PFF GLV+Y
Sbjct: 7   FIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGLVEY 66

Query: 336 MSSGPVVPMVWEGLNVVKTGRXMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAK 515
           + SGPVV MVWEG  VV TGR ++GATNP  ++PGTIRGD  + +GRN+IHGSDSVE+A+
Sbjct: 67  IVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVENAR 126

Query: 516 KEIGLWFTDXEVVGWTPANENWVYE 590
           KEI LWF +  +  W      W+YE
Sbjct: 127 KEIALWFPEG-IAEWRSNQHPWIYE 150


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  184 bits (449), Expect = 7e-47
 Identities = 80/145 (55%), Positives = 103/145 (71%)
 Frame = +3

Query: 156 FIMVKPDGVXRGLVGXXIERFEKXGFXLVGLKFVWPSEXLLQQHYSDLASRPFFPGLVKY 335
           +IM+KPDGV RGLVG  I RFEK GF L GLK     + L Q+HY DL  +PFFPGL++Y
Sbjct: 6   YIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGLIEY 65

Query: 336 MSSGPVVPMVWEGLNVVKTGRXMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAK 515
           ++SGPVV M WEG  VV + R ++GATNP  ++PGTIRGDL +Q GRN++HGSDS ++ K
Sbjct: 66  ITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPDNGK 125

Query: 516 KEIGLWFTDXEVVGWTPANENWVYE 590
           +EI LWF + E+  W      W+ E
Sbjct: 126 REIALWFKEGELCEWESVLTPWLVE 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,877,643
Number of Sequences: 37544
Number of extensions: 255638
Number of successful extensions: 509
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)