Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P05
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   190   1e-48
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    69   5e-12
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    42   5e-04

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  190 bits (463), Expect = 1e-48
 Identities = 89/146 (60%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
 Frame = +3

Query: 156 FIMVKPDGVXRGLVGXXIERFEKXGFXLVGLKFVWPSEXLLQQHYSDLASRPFFPGLVKY 335
           FI +KPDGV RGLVG  I RFE+ G+ LV LK +  S+  L+ HY DL  +PFFP L++Y
Sbjct: 8   FIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLIEY 67

Query: 336 MSSGPVVPMVWEGLNVVKTGRXMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAK 515
           MSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+SA 
Sbjct: 68  MSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVDSAN 127

Query: 516 KEIGLWFTDXEVVGW-TPANENWVYE 590
           +EI  WF   E+  + +P   +WVYE
Sbjct: 128 REIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 37/79 (46%), Positives = 48/79 (60%)
 Frame = +3

Query: 306 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRXMLGATNPADSQPGTIRGDLCIQVGRNII 485
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91

Query: 486 HGSDSVESAKKEIGLWFTD 542
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
 Frame = +3

Query: 132 SRNXVXVLFIMVKPDGVX-RGLVGXXIERFEKXGFXLVGLKFVWPSEXLLQQHYSDLASR 308
           S+N +  L +++KP+ V  R L    +      G  +  ++ +  S  L +Q Y+    +
Sbjct: 6   SQNALKFL-VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGK 64

Query: 309 PFFPGLVKYMSSGPVVPMVWEGLNVVKTGRXMLGATNPADSQPGTIRGDLCIQVGRNIIH 488
            F+  LV+++SSGPV+ M   G      G   L        QP  IR    +   RN+ H
Sbjct: 65  FFYDRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAH 122

Query: 489 GSDSVESAKKEIGLW 533
            SD  ++A+KE+ L+
Sbjct: 123 ASDE-DAAEKELQLF 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,055,267
Number of Sequences: 27780
Number of extensions: 211627
Number of successful extensions: 582
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)