Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_P02
(872 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 145 1e-33
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 138 2e-31
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 117 4e-25
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 116 6e-25
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 116 8e-25
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 114 2e-24
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 113 6e-24
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 110 4e-23
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 107 5e-22
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 106 8e-22
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 104 3e-21
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 103 6e-21
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 103 8e-21
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 102 1e-20
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 102 1e-20
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 100 6e-20
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 100 1e-19
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 97 4e-19
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 97 5e-19
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 95 2e-18
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 94 4e-18
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 92 1e-17
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 92 2e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 92 2e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 87 7e-16
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 85 2e-15
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 83 1e-14
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 82 2e-14
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 81 3e-14
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 81 4e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 79 1e-13
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 70 9e-11
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 67 6e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 65 2e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 64 6e-09
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 62 2e-08
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 61 4e-08
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 60 5e-08
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 60 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 57 5e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 54 5e-06
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 52 2e-05
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 52 3e-05
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 52 3e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 52 3e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 6e-05
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 3e-04
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 48 4e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 46 0.001
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 46 0.002
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 45 0.003
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 45 0.003
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 45 0.003
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 44 0.004
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 44 0.004
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 44 0.005
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 44 0.007
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 44 0.007
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 44 0.007
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 44 0.007
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 44 0.007
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 43 0.012
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 43 0.012
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 42 0.015
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 42 0.020
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 41 0.036
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 41 0.047
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 41 0.047
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 41 0.047
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 40 0.083
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 40 0.083
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 39 0.19
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 38 0.25
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 38 0.44
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 38 0.44
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 37 0.77
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 36 1.0
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 35 2.3
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 35 3.1
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 33 7.2
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 33 7.2
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 33 9.5
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 145 bits (351), Expect = 1e-33
Identities = 80/148 (54%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
IVENGAGTG TVYPPLSSNIAH G SVDL IFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
SFDQ+PLFV AVGI TDR LN SFFDP GGGDPILY LF
Sbjct: 174 SFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFW 233
Query: 757 FFGNPEVIF*FXRIWYNXHIIY-KKEEK 837
FFG+P+++F F + + H+++ KK EK
Sbjct: 234 FFGHPKLMFSFSQDLVSFHMLFPKKVEK 261
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 138 bits (333), Expect = 2e-31
Identities = 74/127 (58%), Positives = 77/127 (60%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
IVENGAGTG TVYPPLSSNIAH G SVDL IFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
SFDQ+PLF+ AVGI TDR LN SFFDP GGGDPILY LF
Sbjct: 150 SFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFW 209
Query: 757 FFGNPEV 777
FFG+PEV
Sbjct: 210 FFGHPEV 216
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 117 bits (281), Expect = 4e-25
Identities = 70/157 (44%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
Q PLFV AV + TDR LN +FFDP GGGDPILY LF F
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 760 FGNPEV-IF*FXRIWYNXHII-YKKEEKRNFGCLXII 864
FG+PEV I H++ Y +K FG + ++
Sbjct: 238 FGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMV 274
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 116 bits (280), Expect = 6e-25
Identities = 71/157 (45%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
Q PLFV +V I TDR LN +FFDP GGGDPILY LF F
Sbjct: 179 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 238
Query: 760 FGNPEV-IF*FXRIWYNXHII-YKKEEKRNFGCLXII 864
FG+PEV I H++ Y +K FG + ++
Sbjct: 239 FGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMV 275
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 116 bits (279), Expect = 8e-25
Identities = 63/126 (50%), Positives = 75/126 (59%)
Frame = -1
Query: 740 YKIGSPPPXGSKNDXFXFRSVNNIXIAPAKTXSDNNNKNXXIPTAHTNKGN*SNDILFNR 561
+ IGSPPP GSK + F FRSV +I IAPA T S++N+K T TN G S I +R
Sbjct: 4 WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADR 63
Query: 560 XXXXXXXXXXXXXIDEIPAKCSEKIXRSTDLPLCAILDESGG*TVHPVPAPFSTILLEIN 381
I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L +
Sbjct: 64 MLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKS 123
Query: 380 NIREGG 363
++EGG
Sbjct: 124 KVKEGG 129
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 114 bits (275), Expect = 2e-24
Identities = 68/157 (43%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
Q PLFV +V + TDR LN +FFDP GGGDPILY LF F
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 760 FGNPEV-IF*FXRIWYNXHII-YKKEEKRNFGCLXII 864
FG+PEV I H++ Y +K FG + ++
Sbjct: 238 FGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMV 274
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 113 bits (272), Expect = 6e-24
Identities = 69/158 (43%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAM 176
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ Q PLFV +V I TDR LN +FFDP GGGDPILY LF
Sbjct: 177 TQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFW 236
Query: 757 FFGNPEV-IF*FXRIWYNXHII-YKKEEKRNFGCLXII 864
FFG+PEV I HI+ Y +K FG + ++
Sbjct: 237 FFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMV 274
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 110 bits (265), Expect = 4e-23
Identities = 67/156 (42%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE GAGTG TVYPPLS +H G SVDL IFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
+LPLFV A+ + TDR N SF+DP GGGDPILY LF F
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWF 237
Query: 760 FGNPEV-IF*FXRIWYNXHIIYKKEEKRNFGCLXII 864
FG+PEV I HI+ K FG L ++
Sbjct: 238 FGHPEVYILIIPGFGMVSHIVSAFSGKPVFGYLGMV 273
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 107 bits (256), Expect = 5e-22
Identities = 64/157 (40%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE G+GTG TVYPPLS +H G +VDL IFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV +V + TDR N +FFDP GGGDPILY LF
Sbjct: 180 TMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFW 239
Query: 757 FFGNPEV-IF*FXRIWYNXHIIYKKEEKRNFGCLXII 864
FFG+PEV I HI+ K FG L ++
Sbjct: 240 FFGHPEVYILILPGFGIISHIVSTFSGKPVFGYLGMV 276
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 106 bits (254), Expect = 8e-22
Identities = 65/154 (42%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Frame = +1
Query: 409 GAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 588
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 589 LPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGN 768
+ LF +V I TDR +N SFFDP GGGDPILY LF FFG+
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 769 PEV-IF*FXRIWYNXHIIYKKE-EKRNFGCLXII 864
PEV I H+I+ + +K FG L +I
Sbjct: 225 PEVYILILPGFGIISHMIFNESGKKETFGMLGMI 258
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 104 bits (249), Expect = 3e-21
Identities = 58/123 (47%), Positives = 66/123 (53%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE GAGTG TV PPLS+NIAH G SVDL IFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
++PLFV AV I TDR +N SFFDP GGGDPILY LF F
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWF 156
Query: 760 FGN 768
G+
Sbjct: 157 XGH 159
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 103 bits (247), Expect = 6e-21
Identities = 57/123 (46%), Positives = 66/123 (53%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE GAGTG TVYPPL+S AH G SVD+ IFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGM 177
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ ++PLFV +V I TDR N +FFDP GGGDPILY LF
Sbjct: 178 TMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFW 237
Query: 757 FFG 765
FFG
Sbjct: 238 FFG 240
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 103 bits (246), Expect = 8e-21
Identities = 63/157 (40%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE+GAGTG TVYPPLSS AH G SVDL IF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV ++ I DR N SFF+ GGGDPILY LF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 757 FFGNPEV-IF*FXRIWYNXHIIYKKEEKRNFGCLXII 864
FFG+PEV I H++ +K FG + ++
Sbjct: 238 FFGHPEVYILIIPGFGIISHVVSTYSKKPVFGEISMV 274
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 102 bits (245), Expect = 1e-20
Identities = 64/157 (40%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE+GAGTG TVYPPLSS AH G SVDL IFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
S ++PLFV A+ I DR N SFF+ GGGDPI Y F
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFW 237
Query: 757 FFGNPEV-IF*FXRIWYNXHIIYKKEEKRNFGCLXII 864
FFG+PEV I HI+ +K FG + ++
Sbjct: 238 FFGHPEVYILIIPGFGIVSHIVSTYSKKPVFGEISMV 274
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 102 bits (244), Expect = 1e-20
Identities = 62/157 (39%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE G GTG TVYPPLSS +H G +VDL IFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
S ++PLFV ++ + TDR N SFFD GGGDPILY LF
Sbjct: 185 SMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFW 244
Query: 757 FFGNPEV-IF*FXRIWYNXHIIYKKEEKRNFGCLXII 864
FFG+PEV I HI+ K FG + ++
Sbjct: 245 FFGHPEVYILILPGFGMISHIVSTFSRKPVFGYIGMV 281
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 100 bits (239), Expect = 6e-20
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE+GAGTG TVYPPLS N AH G SVDL IFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF 753
+ + LFV +V I TDR N SFFDP GGGDPILY LF
Sbjct: 161 IELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 99.5 bits (237), Expect = 1e-19
Identities = 63/155 (40%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Frame = +1
Query: 403 ENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 582
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 583 DQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FF 762
LPLFV +V + DR N SF+DP GGGD +LY LF FF
Sbjct: 183 KDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFF 242
Query: 763 GNPEV-IF*FXRIWYNXHIIYKKEEKRNFGCLXII 864
G+PEV I HII +KR FG + +I
Sbjct: 243 GHPEVYILILPGFGLVSHIIATFSKKRVFGHVPMI 277
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 97.5 bits (232), Expect = 4e-19
Identities = 56/126 (44%), Positives = 63/126 (50%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
+ENG GTG T+YPPLS +H G SVDL IF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
+L LF AV I TDR N SFF+ GGGDPILY LF F
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWF 238
Query: 760 FGNPEV 777
FG+PEV
Sbjct: 239 FGHPEV 244
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 97.1 bits (231), Expect = 5e-19
Identities = 54/118 (45%), Positives = 61/118 (51%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE GAGTG TVYPPLS +H G SVDL IFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF 753
+LPLFV A+ + TDR N SF+DP GGGDPILY LF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 95.5 bits (227), Expect = 2e-18
Identities = 55/123 (44%), Positives = 63/123 (51%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE+GAGTG TVYPPLSS AH G SVDL IF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV ++ I DR N SFF+ GGGDPILY LF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 757 FFG 765
FFG
Sbjct: 238 FFG 240
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 94.3 bits (224), Expect = 4e-18
Identities = 54/123 (43%), Positives = 63/123 (51%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE+GAGTG TVYPPL+S AH G SVDL IF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV A+ I DR N SFF+ GGGDPILY LF
Sbjct: 178 TMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFW 237
Query: 757 FFG 765
FFG
Sbjct: 238 FFG 240
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 92.3 bits (219), Expect = 1e-17
Identities = 54/127 (42%), Positives = 62/127 (48%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGI 203
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+L LF AV I TDR LN SF++ GGGD ILY LF
Sbjct: 204 KLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFW 263
Query: 757 FFGNPEV 777
FFG+PEV
Sbjct: 264 FFGHPEV 270
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 91.9 bits (218), Expect = 2e-17
Identities = 48/127 (37%), Positives = 66/127 (51%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+++ G G+G T+YPPL+S +H G S+D+ IF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV +V I DR N SFF GGGDP+LY +F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 757 FFGNPEV 777
FFG+PEV
Sbjct: 255 FFGHPEV 261
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 91.9 bits (218), Expect = 2e-17
Identities = 48/127 (37%), Positives = 66/127 (51%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+++ G G+G T+YPPL+S +H G S+D+ IF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV +V I DR N SFF GGGDP+LY +F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 757 FFGNPEV 777
FFG+PEV
Sbjct: 255 FFGHPEV 261
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 86.6 bits (205), Expect = 7e-16
Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+++ GAG G T YPP+S+ R+VD IF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ ++PLF +V + TDR +FFDP GGGDPIL+ +F
Sbjct: 283 TLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFW 342
Query: 757 FFGNPEV-IF*FXRIWYNXHIIYKKEEKRNFGCLXII 864
FFG+PEV I HI+ +K FG L ++
Sbjct: 343 FFGHPEVYIVILPAFGVISHIVATFSKKPIFGYLPMV 379
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 85.0 bits (201), Expect = 2e-15
Identities = 45/123 (36%), Positives = 62/123 (50%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+++ G G+G T+YPPL+S +H G S+D+ IF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV +V I DR N SFF GGGDP+LY +F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 757 FFG 765
FFG
Sbjct: 255 FFG 257
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 82.6 bits (195), Expect = 1e-14
Identities = 49/105 (46%), Positives = 53/105 (50%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDP 714
Q PLFV AV I TDR LN +FFDP
Sbjct: 167 QYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 82.2 bits (194), Expect = 2e-14
Identities = 48/124 (38%), Positives = 61/124 (49%)
Frame = +1
Query: 406 NGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 585
NGAGTG TVY PLS++ G +VD+ I SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 586 QLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFG 765
++PLFV +V + TDR +F+D GGGDP LY LF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 766 NPEV 777
+PEV
Sbjct: 283 HPEV 286
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 81.4 bits (192), Expect = 3e-14
Identities = 48/127 (37%), Positives = 61/127 (48%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+VE GAGTG TVY PL+ +H G +VDL IFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
++ +PLF AV DR N SFF+ GGGD +LY LF
Sbjct: 183 KYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFY 242
Query: 757 FFGNPEV 777
++ +PEV
Sbjct: 243 WWNHPEV 249
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 81.0 bits (191), Expect = 4e-14
Identities = 45/128 (35%), Positives = 64/128 (50%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+++ G G+G T+YPPL+S +H G S+D+ IF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV +V I DR N SFF GGGDP+LY +
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI-- 252
Query: 757 FFGNPEVI 780
F+ NP +I
Sbjct: 253 FYKNPVLI 260
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 79.0 bits (186), Expect = 1e-13
Identities = 52/131 (39%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Frame = +1
Query: 397 IVENGAGTG*TV----YPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXX 564
I+E G GTG T+ YPPLS +H G SVDL IF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMR 205
Query: 565 XXXXSFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYX 744
+L LF A TDR N SFF+ GGGDPIL+
Sbjct: 206 TPGIKLHKLALFGWAT-------WSSRSRYFLGITMVLTDRNFNTSFFEVAGGGDPILFQ 258
Query: 745 XLF*FFGNPEV 777
LF FFG+PEV
Sbjct: 259 HLFWFFGHPEV 269
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 69.7 bits (163), Expect = 9e-11
Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +1
Query: 409 GAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 588
G G G T+YPPLS++ G +DL +FSLH+AG+SS F
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMS 182
Query: 589 L-PLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFG 765
L P+ + + DR + SF+ P GGGDPIL+ LF FFG
Sbjct: 183 LNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFG 242
Query: 766 NPEV 777
+PEV
Sbjct: 243 HPEV 246
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 66.9 bits (156), Expect = 6e-10
Identities = 42/127 (33%), Positives = 53/127 (41%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFF 179
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
SF LF+ A I DR N SF+D GGGD IL+ +F
Sbjct: 180 SFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFW 239
Query: 757 FFGNPEV 777
FFG+PEV
Sbjct: 240 FFGHPEV 246
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/71 (50%), Positives = 41/71 (57%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
VE GAGTG TVYPPLS +H G SVDL IFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 580 FDQLPLFV*AV 612
+LPLFV A+
Sbjct: 178 LHKLPLFVWAI 188
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 63.7 bits (148), Expect = 6e-09
Identities = 39/126 (30%), Positives = 57/126 (45%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFV 183
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
D++ ++ + DR N FF+ GDP+LY LF F
Sbjct: 184 IDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWF 243
Query: 760 FGNPEV 777
FG+PEV
Sbjct: 244 FGHPEV 249
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 61.7 bits (143), Expect = 2e-08
Identities = 44/123 (35%), Positives = 52/123 (42%)
Frame = +1
Query: 409 GAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 588
G G G T+YPPLS G VD +FSLHLAG+SS S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS--- 272
Query: 589 LPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGN 768
+ V A DR +FF+P GGGDPIL+ LF FFG+
Sbjct: 273 --IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGH 330
Query: 769 PEV 777
PEV
Sbjct: 331 PEV 333
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 60.9 bits (141), Expect = 4e-08
Identities = 39/126 (30%), Positives = 50/126 (39%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
+ G G+ T YPPLS S+D I LH GI S +
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
DQ+ +FV + DR N SF+D GG+P+LY LF F
Sbjct: 188 LDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWF 247
Query: 760 FGNPEV 777
FG+PEV
Sbjct: 248 FGHPEV 253
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 60.5 bits (140), Expect = 5e-08
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Frame = +1
Query: 403 ENGAGTG*TVYPPLSSNIAHRGR-SVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
E G GTG T+YPPLS+++ +VD+ IF L ++G++S +
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLT 183
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
L + ++ I +D N FFDP GDPILY LF F
Sbjct: 184 LGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWF 243
Query: 760 FGNPEV 777
FG+PEV
Sbjct: 244 FGHPEV 249
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 59.7 bits (138), Expect = 1e-07
Identities = 42/122 (34%), Positives = 53/122 (43%)
Frame = +1
Query: 412 AGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 591
A G T YPPLSS SV+ +FSLHLAGI+S + L
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSL 165
Query: 592 PLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNP 771
LF ++ + TD+ L F+D GGDP+LY LF FFG+P
Sbjct: 166 SLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHP 225
Query: 772 EV 777
EV
Sbjct: 226 EV 227
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 57.2 bits (132), Expect = 5e-07
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISS 519
+VE G G G TVYPPL+S + H G SVD IFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 54.0 bits (124), Expect = 5e-06
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFS 495
+VENGAGTG TVYPPLSS AH G SVDL I+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = +3
Query: 600 CMSCRDXXXXXXXXTXCFSWSYXNIINRSXXXXXXF*SXWRRRPNFIXXFILIFW 764
CM C + CFS S+ IIN F W P + FILIFW
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFW 151
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 52.0 bits (119), Expect = 2e-05
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 418 TG*TVYPPLSSNIAHR-GRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 594
+G T+YPPLS+ A G ++DL + +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 595 LFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPE 774
++ ++ + DR +N + +D G DP+LY LF FFG+PE
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPE 252
Query: 775 V 777
V
Sbjct: 253 V 253
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 51.6 bits (118), Expect = 3e-05
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 1/157 (0%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
V+ G G Y PLS G+ D+ + +S+ S
Sbjct: 134 VDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMS 193
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
D++PLFV ++ + DR + FF+P GGD +L+ LF F
Sbjct: 194 LDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWF 253
Query: 760 FGNPEVIF*F-XRIWYNXHIIYKKEEKRNFGCLXIIM 867
FG+PEV F + I+ ++ FG L ++M
Sbjct: 254 FGHPEVYIIFLPAVGMVSSIVATFTQRPVFGYLAMVM 290
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 51.6 bits (118), Expect = 3e-05
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Frame = +1
Query: 412 AGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 591
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 592 PLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPX-----GGGDPILYXXLF* 756
PL + + + DR FF GGGDPIL+ LF
Sbjct: 215 PLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFW 274
Query: 757 FFGNPEVIF*FXRIW 801
FG+PEV W
Sbjct: 275 IFGHPEVYIMILPAW 289
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = +1
Query: 439 PLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 618
PL+S+IAH G SVD+ IFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.4 bits (115), Expect = 6e-05
Identities = 46/117 (39%), Positives = 51/117 (43%)
Frame = +1
Query: 409 GAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 588
G G VYPP SS +AH +VDL IF LHLAGISS ++
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGN 170
Query: 589 LPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
LF R N SFF P G P + F F
Sbjct: 171 FSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 48.0 bits (109), Expect = 3e-04
Identities = 36/119 (30%), Positives = 44/119 (36%)
Frame = +1
Query: 421 G*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 600
G T YPPLS G +L I SL L G SS +PLF
Sbjct: 138 GWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLF 195
Query: 601 V*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
A+ D SFF+P GGGDP++Y LF F+ +P V
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAV 254
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 47.6 bits (108), Expect = 4e-04
Identities = 33/115 (28%), Positives = 43/115 (37%)
Frame = +1
Query: 433 YPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
Y PLSS + VD I L + GI S S ++PLFV +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 613 GIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
+ DR L +FFDP GG +L+ F FG+PEV
Sbjct: 208 LMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEV 262
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/127 (25%), Positives = 47/127 (37%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
++ G TG T Y P S AH +V +F + G SS
Sbjct: 146 MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGI 202
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
++ ++PLFV A+ + FDP GGDP+L+ LF
Sbjct: 203 TWFKMPLFVWAIYATSCIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFW 262
Query: 757 FFGNPEV 777
F+ +P V
Sbjct: 263 FYSHPAV 269
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 45.6 bits (103), Expect = 0.002
Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 2/124 (1%)
Frame = +1
Query: 412 AGTG*TVYPPLS--SNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 585
A +G YPP+S + + H L I ++ L+GISS F
Sbjct: 146 ASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFF 205
Query: 586 QLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFG 765
++P+FV D SFF P GGGDP+L+ F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 766 NPEV 777
+P V
Sbjct: 266 HPAV 269
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/120 (25%), Positives = 44/120 (36%)
Frame = +1
Query: 430 VYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 609
+YPPL+ G + D + + IS+ S ++P+F A
Sbjct: 154 MYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWA 213
Query: 610 VGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEVIF*F 789
+ I +R FF GGDP+L+ LF FFG+PEV F
Sbjct: 214 MLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/120 (25%), Positives = 46/120 (38%)
Frame = +1
Query: 430 VYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 609
+Y PLS++ G S D + + LA I+S S ++P+ +
Sbjct: 170 MYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWY 229
Query: 610 VGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEVIF*F 789
+ +R L FFD GGDP+L+ LF FG+PEV F
Sbjct: 230 LLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 700 SFFDPXGGGDPILYXXLF*FFGNPEV-IF*FXRIWYNXHIIYKKEEKRN-FGCLXII 864
+FFDP GGGD IL+ LF FFG+PEV I H+I KR FG L ++
Sbjct: 195 TFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGMV 251
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 44.4 bits (100), Expect = 0.004
Identities = 31/117 (26%), Positives = 45/117 (38%)
Frame = +1
Query: 427 TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 606
T YPP S N + L +F +HL G SS +F + LFV
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVH 142
Query: 607 AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
+ D+ L +FF+P GGDP++Y +F F+ +P V
Sbjct: 143 TLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVV 199
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 44.4 bits (100), Expect = 0.004
Identities = 35/114 (30%), Positives = 43/114 (37%)
Frame = +1
Query: 436 PPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 616 IXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
TDR FF+P GGDPI Y LF F +PEV
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEV 245
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 44.0 bits (99), Expect = 0.005
Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 6/155 (3%)
Frame = +1
Query: 403 ENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 582
++G G T+YPPLS+ + VDL + + +AG SS
Sbjct: 126 QHGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKM 183
Query: 583 DQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFF-----DPXGGGDPILYXX 747
+ LF +V +R L FF DP GDP L+
Sbjct: 184 LDMSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQH 243
Query: 748 LF*FFGNPEV-IF*FXRIWYNXHIIYKKEEKRNFG 849
+F FFG+PEV I + +I + +R +G
Sbjct: 244 IFWFFGHPEVYILVLPAMGLVSEVIQRMARRRAYG 278
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 43.6 bits (98), Expect = 0.007
Identities = 33/127 (25%), Positives = 46/127 (36%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+V+ GA TG T Y P S+ + V L F L G SS
Sbjct: 139 MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGM 195
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ +LPLFV ++ + FDP GGDP+L+ F
Sbjct: 196 GWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFW 255
Query: 757 FFGNPEV 777
F+ +P V
Sbjct: 256 FYSHPAV 262
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 43.6 bits (98), Expect = 0.007
Identities = 30/124 (24%), Positives = 47/124 (37%)
Frame = +1
Query: 418 TG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 597
+G +YPPL++ G D+ + L ++S + +PL
Sbjct: 168 SGWFMYPPLATQ--DEGLGSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPL 225
Query: 598 FV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
+ V + +R + FFDP GGDP+L+ LF FG+PEV
Sbjct: 226 YAWYVLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEV 285
Query: 778 IF*F 789
F
Sbjct: 286 YIIF 289
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 43.6 bits (98), Expect = 0.007
Identities = 29/124 (23%), Positives = 45/124 (36%)
Frame = +1
Query: 418 TG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 597
+G +YPPLSS + G + D + + IS+ S ++P+
Sbjct: 140 SGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPI 199
Query: 598 FV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
F + +R + FF GGD +L+ LF FG+PEV
Sbjct: 200 FAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEV 259
Query: 778 IF*F 789
F
Sbjct: 260 YIIF 263
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 43.6 bits (98), Expect = 0.007
Identities = 33/122 (27%), Positives = 47/122 (38%)
Frame = +1
Query: 412 AGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 591
A T T+Y PLS ++ +VD+ + LHL G+S+ + L
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDL 236
Query: 592 PLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNP 771
+F + DR +FF GGDPI + LF FFG+P
Sbjct: 237 DIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFT-VAGGDPIFWQHLFWFFGHP 295
Query: 772 EV 777
EV
Sbjct: 296 EV 297
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 43.6 bits (98), Expect = 0.007
Identities = 32/122 (26%), Positives = 45/122 (36%)
Frame = +1
Query: 412 AGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 591
A G T+Y PLS I G D+ I + GI S + ++
Sbjct: 148 ADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRM 207
Query: 592 PLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNP 771
P+F + + DR L +DP GG +L+ LF FFG+P
Sbjct: 208 PIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHP 266
Query: 772 EV 777
EV
Sbjct: 267 EV 268
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 42.7 bits (96), Expect = 0.012
Identities = 32/126 (25%), Positives = 44/126 (34%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
V G Y PL+ VD I + L G++S +
Sbjct: 136 VGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMT 195
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
+++PLFV + DR FF P GGD +L+ LF F
Sbjct: 196 LNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWF 255
Query: 760 FGNPEV 777
FG+PEV
Sbjct: 256 FGHPEV 261
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 42.7 bits (96), Expect = 0.012
Identities = 39/127 (30%), Positives = 50/127 (39%), Gaps = 5/127 (3%)
Frame = +1
Query: 412 AGTG*TVYPPLS-----SNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
A TG T+Y PLS N A+ G VDL + LHL+G+S+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
S+ L +F + DR SFF GG IL+ LF
Sbjct: 264 SWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFFAGEGGA--ILWQHLFW 321
Query: 757 FFGNPEV 777
FFG+PEV
Sbjct: 322 FFGHPEV 328
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 42.3 bits (95), Expect = 0.015
Identities = 27/119 (22%), Positives = 46/119 (38%)
Frame = +1
Query: 421 G*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 600
G T Y LS + +G +D + L ++G+ + ++ +LPLF
Sbjct: 136 GWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
Query: 601 V*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
+ DR +FF+P GG+ +++ LF FG+PEV
Sbjct: 194 TWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEV 252
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 41.9 bits (94), Expect = 0.020
Identities = 37/146 (25%), Positives = 54/146 (36%), Gaps = 1/146 (0%)
Frame = +1
Query: 433 YPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPPL+ G +D + IS+ S +++P+FV AV
Sbjct: 152 YPPLAGASFSPGLGLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
Query: 613 GIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEVIF*F- 789
+ DR FF GDPIL+ LF FFG+PEV F
Sbjct: 212 LVMSFMIVFALPPLVIASLMLALDRMAGMHFFTA-ASGDPILWQHLFWFFGHPEVYIIFI 270
Query: 790 XRIWYNXHIIYKKEEKRNFGCLXIIM 867
+ II ++ FG + I++
Sbjct: 271 PALGMVSSIIITFTQRPIFGYIPIVL 296
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 41.1 bits (92), Expect = 0.036
Identities = 28/124 (22%), Positives = 45/124 (36%)
Frame = +1
Query: 418 TG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 597
+G +YPPL+S + G + D + + IS+ S D++P+
Sbjct: 140 SGWFMYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPI 199
Query: 598 FV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
+ + +R FF GGD +L+ LF FG+PEV
Sbjct: 200 YGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEV 259
Query: 778 IF*F 789
F
Sbjct: 260 YIIF 263
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 40.7 bits (91), Expect = 0.047
Identities = 27/118 (22%), Positives = 44/118 (37%)
Frame = +1
Query: 436 PPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 615
PPL++ G + D + + IS+ + ++P+F A+
Sbjct: 215 PPLTTETYSPGYNADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAML 274
Query: 616 IXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEVIF*F 789
+ +R + FF GGDP+L+ LF FFG+PEV F
Sbjct: 275 VFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIF 332
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 40.7 bits (91), Expect = 0.047
Identities = 30/122 (24%), Positives = 44/122 (36%)
Frame = +1
Query: 412 AGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 591
A TG YPPL+ G VD I++L L+G+ + +
Sbjct: 166 AKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDM 225
Query: 592 PLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNP 771
P+F DR L+ F GG+P++Y LF +G+P
Sbjct: 226 PIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHP 285
Query: 772 EV 777
EV
Sbjct: 286 EV 287
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 40.7 bits (91), Expect = 0.047
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Frame = +1
Query: 421 G*TVYPPLSSNIAHRG-RSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 591
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 592 PLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNP 771
P ++ + DR +FF+ GGDPIL LF FFG+P
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 772 EV 777
EV
Sbjct: 403 EV 404
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 39.9 bits (89), Expect = 0.083
Identities = 29/127 (22%), Positives = 44/127 (34%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
++ G T Y PL+SN G + + L +AGI +
Sbjct: 157 VIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGM 216
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
+ ++P+F I DR FF GG P+L+ LF
Sbjct: 217 TLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFW 276
Query: 757 FFGNPEV 777
+G+PEV
Sbjct: 277 IWGHPEV 283
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 39.9 bits (89), Expect = 0.083
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 2/127 (1%)
Frame = +1
Query: 403 ENGA-GTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
E+GA G T+Y PL++ I G +DL ++ L +S
Sbjct: 127 ESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIG 186
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFF-DPXGGGDPILYXXLF* 756
+ ++P+F ++ DR L FF +P GG +L+ LF
Sbjct: 187 WFKMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFW 244
Query: 757 FFGNPEV 777
FFG+PEV
Sbjct: 245 FFGHPEV 251
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 38.7 bits (86), Expect = 0.19
Identities = 31/126 (24%), Positives = 45/126 (35%)
Frame = +1
Query: 400 VENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 579
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 163 VGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMK 222
Query: 580 FDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*F 759
+P+F DR L+ FF GG+ ++Y LF
Sbjct: 223 LMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWA 282
Query: 760 FGNPEV 777
+G+PEV
Sbjct: 283 WGHPEV 288
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 38.3 bits (85), Expect = 0.25
Identities = 29/119 (24%), Positives = 45/119 (37%)
Frame = +1
Query: 421 G*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 600
G T Y P S A VD + ++ L G SS S ++P++
Sbjct: 138 GWTFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIY 194
Query: 601 V*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
V +V +R + S+F+P GGDP+L+ F F+ +P V
Sbjct: 195 VWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTV 253
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 37.5 bits (83), Expect = 0.44
Identities = 28/115 (24%), Positives = 40/115 (34%)
Frame = +1
Query: 433 YPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 193 YPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTA 252
Query: 613 GIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
DR L+ FF GG+ + + +F FG+PEV
Sbjct: 253 LCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEV 307
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 37.5 bits (83), Expect = 0.44
Identities = 29/115 (25%), Positives = 40/115 (34%)
Frame = +1
Query: 433 YPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 612
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 613 GIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
DR FFD GG P+L+ LF F +P V
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWV 279
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 36.7 bits (81), Expect = 0.77
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 682 DRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
+R FFD GG P+L+ LF FFG+PEV
Sbjct: 210 ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEV 241
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 36.3 bits (80), Expect = 1.0
Identities = 34/138 (24%), Positives = 50/138 (36%), Gaps = 14/138 (10%)
Frame = +1
Query: 406 NGAGTG*TVYPPLS---SNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 155 HGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGM 214
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXG-----------G 723
+ +LPL + A+ I DR + FF P G G
Sbjct: 215 TMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGG 274
Query: 724 GDPILYXXLF*FFGNPEV 777
G P+L+ LF F+ +P V
Sbjct: 275 GQPLLWQHLFWFYSHPAV 292
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 35.1 bits (77), Expect = 2.3
Identities = 29/127 (22%), Positives = 45/127 (35%)
Frame = +1
Query: 397 IVENGAGTG*TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 576
I+ A TG YPPLS VD +S+ ++GI +
Sbjct: 156 IIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKL 215
Query: 577 SFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF* 756
F+++ +F+ DR L+ F+ GG +LY L
Sbjct: 216 FFNKISIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIW 275
Query: 757 FFGNPEV 777
+G+PEV
Sbjct: 276 AWGHPEV 282
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 34.7 bits (76), Expect = 3.1
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 10/42 (23%)
Frame = +1
Query: 682 DRXLNXSFFDPX----------GGGDPILYXXLF*FFGNPEV 777
DR L SFF P GGG P+L+ LF FFG+PEV
Sbjct: 242 DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEV 283
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 33.5 bits (73), Expect = 7.2
Identities = 29/117 (24%), Positives = 41/117 (35%)
Frame = +1
Query: 427 TVYPPLSSNIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 606
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 130 TGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVW 186
Query: 607 AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPXGGGDPILYXXLF*FFGNPEV 777
A D+ + FFD GGD + Y LF F+ +P V
Sbjct: 187 ATLAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAV 243
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 33.5 bits (73), Expect = 7.2
Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 14/140 (10%)
Frame = +1
Query: 400 VENGAGTG*-TVYPPLSS---NIAHRGRSVDLXIFSLHLAGISSXXXXXXXXXXXXXXXX 567
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 166 LETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRV 225
Query: 568 XXXSFDQLPLFV*AVGIXXXXXXXXXXXXXXXXXXXXTDRXLNXSFFDPX---------- 717
SF +LPL + A I DR L SFF
Sbjct: 226 KGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHH 285
Query: 718 GGGDPILYXXLF*FFGNPEV 777
GG P+L+ LF F G+PEV
Sbjct: 286 QGGSPVLFQHLFWFLGHPEV 305
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 33.1 bits (72), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 682 DRXLNXSFFDPXGGGDPILYXXLF*FFGNPEVIF 783
DR L FF GG+ +LY LF +G+PEV F
Sbjct: 275 DRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYF 308
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,396,929
Number of Sequences: 1657284
Number of extensions: 6073456
Number of successful extensions: 13441
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 11103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13114
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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