Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P01
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   0.93 
03_01_0483 + 3689155-3689814                                           30   2.8  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969...    29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +2

Query: 782 PXPPXXPRPXXPLSGYLSXXXPXPXXXPP 868
           P PP  P P  P S Y S   P P   PP
Sbjct: 565 PPPPPPPPPPLPQSNYASSQPPPPPPPPP 593


>03_01_0483 + 3689155-3689814
          Length = 219

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -2

Query: 711 GATXPRRGGKADRYPVXGQGXKQESARGSXXGGNA 607
           G   P RGG     PV G G   +  RG+  G NA
Sbjct: 25  GGADPVRGGGGGADPVCGDGGGADQLRGNGGGSNA 59


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 338 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQXITQ--EXTCEXKASXRPGTV 493
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>01_06_1678 -
           39095986-39096205,39096400-39096477,39096578-39096949,
           39097374-39097671,39097867-39098077,39098331-39099023
          Length = 623

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
 Frame = +3

Query: 714 SHXXPCXYXXFXVG----PSAPXWAVXPNPPXXPDPXXPYPXTYPXXXXP 851
           +H  PC       G    P  P     P+PP  P P  P+P  +P    P
Sbjct: 98  THVVPCHEDDELSGERHCPPRPPPPPPPHPPEDPPPHPPHPPDHPPPPPP 147


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 287 NESAN---ARGEAVCVLGALPLPRSLTRCAR 370
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,148,392
Number of Sequences: 37544
Number of extensions: 326177
Number of successful extensions: 1187
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)