Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_P01
         (883 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    31   7.3  
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.              30   9.7  
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.     30   9.7  

>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 26/88 (29%), Positives = 27/88 (30%)
 Frame = +2

Query: 614 PPXKLPRALSCFXPCPXTGYLSAFPPLRGXVAPFSXXTLXXSPXXCRSXRSXLGCVPXPP 793
           PP  LP  L    P P    +SA PPL     P         P    S        P PP
Sbjct: 302 PPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPP-------PPPLPPPSSAGPPPPPPPPP 354

Query: 794 XXPRPXXPLSGYLSXXXPXPXXXPPYXP 877
               P  P  G      P P   PP  P
Sbjct: 355 LPNSPAPPNPGGPPPAPPPPGLAPPPPP 382


>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
          Length = 1822

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +2

Query: 779 VPXPPXXPRPXXPLSGYLSXXXPXPXXXPPYXP 877
           +P PP  P P  P  GY     P P   PP  P
Sbjct: 81  LPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGP 113


>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
          Length = 1112

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +2

Query: 782 PXPPXXPRPXXPLSGYLSXXXPXPXXXPP 868
           P PP  P P  PL G  S   P P   PP
Sbjct: 582 PPPPPPPPPPPPLPGPASETVPAPPLAPP 610


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,652,038
Number of Sequences: 237096
Number of extensions: 1724285
Number of successful extensions: 5943
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5783
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)