Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_O23
         (1438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40030-6|AAA81135.3|  431|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U40030-5|AAR12976.2|  506|Caenorhabditis elegans Hypothetical pr...    31   1.5  

>U40030-6|AAA81135.3|  431|Caenorhabditis elegans Hypothetical
           protein T13C2.3a protein.
          Length = 431

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/44 (38%), Positives = 17/44 (38%)
 Frame = +1

Query: 526 PXXXSTTTXXGXTXXTTIXXXPTPXTXRXPTRNQPXXXPXXPLP 657
           P   STTT    T  TT    PT  T   PT   P      PLP
Sbjct: 317 PSTTSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLP 360


>U40030-5|AAR12976.2|  506|Caenorhabditis elegans Hypothetical
           protein T13C2.3b protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/44 (38%), Positives = 17/44 (38%)
 Frame = +1

Query: 526 PXXXSTTTXXGXTXXTTIXXXPTPXTXRXPTRNQPXXXPXXPLP 657
           P   STTT    T  TT    PT  T   PT   P      PLP
Sbjct: 392 PSTTSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLP 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.127    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,406,999
Number of Sequences: 27780
Number of extensions: 99325
Number of successful extensions: 77
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4100231132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)