Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_O19
(1131 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 39 0.007
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.013
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.013
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.013
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.070
Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical pr... 35 0.12
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.16
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.37
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.37
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.65
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.65
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.86
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.86
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.86
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.1
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.1
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 31 1.1
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 31 1.1
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 2.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 2.0
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z74032-9|CAA98464.2| 80|Caenorhabditis elegans Hypothetical pr... 30 3.5
U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned expre... 30 3.5
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.1
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 6.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.1
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 29 6.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 8.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 8.0
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 29 8.0
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 8.0
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 38.7 bits (86), Expect = 0.007
Identities = 43/154 (27%), Positives = 44/154 (28%), Gaps = 1/154 (0%)
Frame = -3
Query: 1033 PGGTPXKGPMRXX-WRGGAXGGXXSVRGWGX*RXREXXGGXXEXXGXGXGXWXETXREEP 857
PGG GP R W G GG GWG GG G G G W
Sbjct: 22 PGGWGG-GPGRWGGWGGNRWGGGGGPGGWG----NNGGGGWGRGGGRGGGDWGGN---NG 73
Query: 856 XXXSWGRXXXXRGCXXGQXXXXXXEXXRXVRVXXXXKRVXPXLXSXWXWGGXEXGAX*EW 677
+WG RG G R WGG G W
Sbjct: 74 GGGNWGGNGGGRGDWGGNGGGGRGGGGRG------------------DWGGNNNGGGGNW 115
Query: 676 GXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLG 575
G GG G G G GG GG G G G
Sbjct: 116 GGGGNNDGGWGGNNGGG--GGGRGGGGRGGDGRG 147
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = -3
Query: 718 WXWGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXGLXVXAXGX 539
W GG G +WG G G G GG GG G G G + G G
Sbjct: 57 WGRGGGRGGG--DWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGN 114
Query: 538 XGXANXAXG 512
G G
Sbjct: 115 WGGGGNNDG 123
Score = 31.5 bits (68), Expect = 1.1
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXGLXVXAXGXXG 533
WGG G WG GG G G G GG G G G G G G
Sbjct: 68 WGGNNGGGG-NWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWG 126
Query: 532 XANXAXG 512
N G
Sbjct: 127 GNNGGGG 133
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGG-XXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXG 563
WGG WG GGG G G G G GG W G G G G
Sbjct: 32 WGGWGGN---RWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWG 79
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.013
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P A + P + SP P P PP P P PPP P S PP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.013
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P A + P + SP P P PP P P PPP P S PP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.013
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P A + P + SP P P PP P P PPP P S PP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 35.5 bits (78), Expect = 0.070
Identities = 21/68 (30%), Positives = 25/68 (36%)
Frame = +3
Query: 507 SXPXAXLAXPXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSX 686
S P + P P A P+P P P P H P P ++ PPP PH
Sbjct: 86 SYPQNAVPVPAPPPAP-YPQHAVPAPAPPP--APYPQHAVPAPAPYQQQPPPPPPPPHYP 142
Query: 687 XAPXSXPP 710
P PP
Sbjct: 143 PPPPHYPP 150
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXP 707
P P P H PP PPH P PPP PHS S P
Sbjct: 133 PPPPPPPHYPPPPPHYPP-----------PPPAPHSAYIDHSAP 165
Score = 33.9 bits (74), Expect = 0.21
Identities = 20/63 (31%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Frame = +3
Query: 528 AXPXXPXAXTLSPXKXPSPXX-PXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSX 704
A P P P P P P H P+P P P PPP PH P +
Sbjct: 96 APPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPA- 154
Query: 705 PPH 713
PH
Sbjct: 155 -PH 156
>Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical
protein T19C4.7 protein.
Length = 74
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXG 581
+GG G WG GGG R G G G G GG W G G
Sbjct: 32 YGGGYGGGP--WGYGGGWRRRHWGGYGGGPWGGYGGGPWGGYYG 73
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPP-SPPHIXP--XPXXPXKRXXXPPPXPHSXXAPXSX 704
P A SP P P P PP SPP P P P +R PP P P +
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTP 187
Query: 705 P 707
P
Sbjct: 188 P 188
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAP 695
P P P + P P P PPSP P P PP P S P
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQR-RPPRTPPSPEPRNPPRTPPSPIPP 193
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.5 bits (73), Expect = 0.28
Identities = 23/67 (34%), Positives = 23/67 (34%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXGLXVXAXGXXG 533
WGG G WG GGG G G G G GG W G G G G G G
Sbjct: 48 WGGGGPG----WGRGGGGSG-WGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGG 102
Query: 532 XANXAXG 512
G
Sbjct: 103 GRGGGGG 109
Score = 31.5 bits (68), Expect = 1.1
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXGLXVXAXGXXG 533
WG G WG GG G G G GG GG G G G G G G
Sbjct: 72 WGNNGGGG--NWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRG 129
Query: 532 XANXAXG 512
G
Sbjct: 130 GGGRGRG 136
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXGLXVXAXGXXG 533
WGG G G GG G G G GG GG G G G G G G
Sbjct: 64 WGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGG-GGGGGGRGGGGGGRGGGGGGGGGRG 122
Query: 532 XANXAXG 512
G
Sbjct: 123 GGGGGRG 129
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.37
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAP 695
P P ++P P P PP PP P P PPP P P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXX----PXKRXXXPPPXPHSXXAPXS 701
P P + + P P P PP P + P P P PPP P P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 702 XPP 710
PP
Sbjct: 347 MPP 349
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXP--PSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXP 707
P P +++P P P P P P PP P P P P P P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 708 P 710
P
Sbjct: 322 P 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.37
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAP 695
P P ++P P P PP PP P P PPP P P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXX----PXKRXXXPPPXPHSXXAPXS 701
P P + + P P P PP P + P P P PPP P P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 702 XPP 710
PP
Sbjct: 357 MPP 359
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXP--PSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXP 707
P P +++P P P P P P PP P P P P P P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 708 P 710
P
Sbjct: 332 P 332
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -3
Query: 712 WGGXEXG-AX*EWGX--GGGXXXRLXGXXGXGXMXGGLGGXWXGXXG 581
WGG + G + WG GGG G G G GG G W G G
Sbjct: 170 WGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGG 216
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAP 695
P P P P PP P P P PPP P +P
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Frame = +3
Query: 555 TLSPXKXPSPXXPXHXPPS-----PPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
++ P P P P PP PP P P PPP P P PP
Sbjct: 24 SMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.86
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 1011 GRCGXXGXEGXXGXSXV*EGGGXRGGGXXEGG 916
G CG G G G + GGG GGG GG
Sbjct: 189 GGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGG 220
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.86
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 1011 GRCGXXGXEGXXGXSXV*EGGGXRGGGXXEGG 916
G CG G G G + GGG GGG GG
Sbjct: 189 GGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGG 220
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.86
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXGLXVXAXGXXG 533
+GG G G GGG + G G G GG GG G G + G + G G
Sbjct: 119 YGGGGDGGGGYGGYGGGGYGGMGGGPG-GYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGG 177
Query: 532 XANXAXG 512
+ G
Sbjct: 178 GGDGGYG 184
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 709 GGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLG 575
GG G + G GGG G G G GG+GG G G+G
Sbjct: 171 GGGGYGGGGDGGYGGGGF----GGGGMGGYGGGMGGGGYGGGGMG 211
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -3
Query: 709 GGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXG 563
GG G G GGG G G G GG GG G G G F G
Sbjct: 145 GGYGMGGYGGGGGGGGD---FGGYGGGGMGGGGYGGGGDGGYGGGGFGG 190
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +3
Query: 576 PSPXXPXHXPPSPP-HIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P P PP PP P P PPP P P PP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P PP PP + P P PPP P S PP
Sbjct: 86 PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Frame = +3
Query: 543 PXAXTLSPXKXPSPXXPXHXP--PSPP-HIXPXPXXPXKRXXXPPPXPHSXXAPXSXPPH 713
P + P PSP P P P PP P P P R PP P + P H
Sbjct: 227 PSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPGHQGHH 286
Query: 714 XHXLLXXGXTL 746
++ T+
Sbjct: 287 ITMIMDIMDTM 297
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Frame = -3
Query: 1075 GGGXGXRAXXXTXXPGGTPXKGPMRXXWRGGAXGGXXSVRG------WGX*RXREXXGGX 914
GGG G PG G GG GG +G WG + ++ GG
Sbjct: 224 GGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGW 283
Query: 913 XEXXGXGXGXWXETXREEPXXXSWG 839
+ G G G W +++ WG
Sbjct: 284 GQQGGGGQGGWGGPQQQQ--QGGWG 306
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +3
Query: 570 KXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXP 707
+ P P PP PP P P P + P P P S P P
Sbjct: 252 RSPVPPPVLSIPPPPPPNIPLPTIPQEVQSPPSPRPTSVPPPIPSP 297
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +3
Query: 570 KXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXP 707
+ P P PP PP P P P + P P P S P P
Sbjct: 252 RSPVPPPVLSIPPPPPPNIPLPTIPQEVQSPPSPRPTSVPPPIPSP 297
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Frame = -3
Query: 1075 GGGXGXRAXXXTXXPG--GTPXKGPMRXXWRGGAXGGXXSVRG------WGX*RXREXXG 920
GGG G PG G P G + + GG GG +G WG + ++ G
Sbjct: 186 GGGGGWGGPAQRGGPGAYGGPGGGG-QGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGG 244
Query: 919 GXXEXXGXGXGXWXETXREEPXXXSWG 839
G + G G G W +++ WG
Sbjct: 245 GWGQQGGGGQGGWGGPQQQQ--QGGWG 269
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Frame = -3
Query: 1075 GGGXGXRAXXXTXXPGGTPXKGPMRXXWRGGAXGGXXSVRG------WGX*RXREXXGGX 914
GGG G PG G GG GG +G WG + ++ GG
Sbjct: 186 GGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGW 245
Query: 913 XEXXGXGXGXWXETXREEPXXXSWG 839
+ G G G W +++ WG
Sbjct: 246 GQQGGGGQGGWGGPQQQQ--QGGWG 268
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.5 bits (68), Expect = 1.1
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Frame = -3
Query: 1075 GGGXGXRAXXXTXXPG--GTPXKGPMRXXWRGGAXGGXXSVRG------WGX*RXREXXG 920
GGG G PG G P G + + GG GG +G WG + ++ G
Sbjct: 224 GGGGGWGGPAQRGGPGAYGGPGGGG-QGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGG 282
Query: 919 GXXEXXGXGXGXWXETXREEPXXXSWG 839
G + G G G W +++ WG
Sbjct: 283 GWGQQGGGGQGGWGGPQQQQ--QGGWG 307
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Frame = -3
Query: 1075 GGGXGXRAXXXTXXPGGTPXKGPMRXXWRGGAXGGXXSVRG------WGX*RXREXXGGX 914
GGG G PG G GG GG +G WG + ++ GG
Sbjct: 224 GGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGW 283
Query: 913 XEXXGXGXGXWXETXREEPXXXSWG 839
+ G G G W +++ WG
Sbjct: 284 GQQGGGGQGGWGGPQQQQ--QGGWG 306
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPH-SXXAPXSXPP 710
P P P H P+ H+ P PPP P S AP PP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPH-SXXAPXSXPP 710
P P P H P+ H+ P PPP P S AP PP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 564 PXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXP 677
P P P P P PP P P P PPP P
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP 89
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 543 PXAXTLSPXKXPSPXXPXHXPPSPPHIXPX--PXXPXKRXXXPPPXPHSXXAPXSXPP 710
P + +P P P PP PP + P P PPP P + S PP
Sbjct: 476 PPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPP 533
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +3
Query: 543 PXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P + +P P P P P P P K PPP P P S PP
Sbjct: 459 PSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLP-PIATPSSVPP 513
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = -3
Query: 709 GGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXWXGXXGLGXFXG 563
GG G+ WG GGG R G G G G GG G G G G
Sbjct: 223 GGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGG-GGGGGYGYGGG 270
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P P PP+ P P P P R PPP P S P PP
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIR---PPPIPAS---PPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P P PP+ P P P P R PPP P S P PP
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIR---PPPIPAS---PPPRPP 336
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 564 PXKXPSPXXPXHXPPSPPHIXPXPXXP 644
P + PSP P PPS P P P P
Sbjct: 36 PPRPPSPSRPQRPPPSRPQRPPPPRQP 62
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
PSP P+PP P P P R P P P P PP
Sbjct: 536 PSPEPSPVREPTPP---PPPREPTPREPTPEPEPVREPTPPPPPP 577
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +3
Query: 543 PXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P + +P P P PP PP + P PPP P + S PP
Sbjct: 469 PPSRIPNPSPSPQPAEVSKSPPPPPPL--PPIATPSSVPPPPPPPPALEQEISGPP 522
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 576 PSPXXPXHXP-PSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P+P P P PSP P P K PPP P P S PP
Sbjct: 465 PAPPPPSRIPNPSPS---PQPAEVSKSPPPPPPLP-PIATPSSVPP 506
>Z74032-9|CAA98464.2| 80|Caenorhabditis elegans Hypothetical
protein F35B12.7 protein.
Length = 80
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 712 WGGXEXGAX*EWGXGGGXXXRLXGXXGXGXMXGGLGGXW-XGXXGLGXFXG 563
WGG G G GGG G G GG GG G G G + G
Sbjct: 21 WGGGPYGGYGPRGYGGGYGGGRYGGYGGRGPYGGYGGRGPYGYGGRGPYGG 71
>U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned
expression site protein 8 protein.
Length = 467
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 513 PXAXLAXPXXPXAXTLSPXKXPSPXXPX-HXPP-SPPHIXPXP 635
P A A P + P P+P H PP SPPH+ P P
Sbjct: 142 PPAGYAMPMGAYPIPIPPNIYPTPPFGGFHMPPHSPPHVQPPP 184
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P P + +P P P P P P PPP P AP P
Sbjct: 180 PRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVEP 238
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 603 PPSPPHIXPXPXXPXKRXXXPPPXPHSXXAP 695
PP+PP P P PPP P + AP
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPPAPEAP 155
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 4.6
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +3
Query: 543 PXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPPHXHX 722
P A P P H PP PPH P PPP P P H
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPP---PFMPPPPHFGMGPPRGFMPPPHP 341
Query: 723 LLXXG 737
++ G
Sbjct: 342 MMFRG 346
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 4.6
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +3
Query: 543 PXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPPHXHX 722
P A P P H PP PPH P PPP P P H
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPP---PFMPPPPHFGMGPPRGFMPPPHP 341
Query: 723 LLXXG 737
++ G
Sbjct: 342 MMFRG 346
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +3
Query: 564 PXKXPSPXXPXHXPPSP---PHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P+P P P SP P P P P PPP P + P PP
Sbjct: 82 PYVPPAPLPPPPPPASPCCGPSPVPAPCCP------PPPAPAAPCCPPPPPP 127
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 513 PXAXLAXPXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXP 635
P A L P P + P P+P P P+ P P P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPP 125
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPPHXHXLLXXGXT 743
P P P PP PPH P P P S + + P L+ T
Sbjct: 21 PPPPSPRRAPPPPPHRKPASLSPPPDDENTIRPPSSSESSENIPEEPQELITPNTT 76
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = +3
Query: 576 PSPXXPXHXPP---SPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P P PP PP P P PPP P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 558 LSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXP 677
+S P P P PP PP P P K PPP P
Sbjct: 754 ISGGPPPPPPPPGGCPPPPP---PPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = +3
Query: 576 PSPXXPXHXPP---SPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P P PP PP P P PPP P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 558 LSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXP 677
+S P P P PP PP P P K PPP P
Sbjct: 754 ISGGPPPPPPPPGGCPPPPP---PPPPGGFKGGPPPPPPP 790
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +3
Query: 582 PXXPXHXPPSPPHIXPXPXXPXKRXXXPPP-XPHSXXAPXSXPP 710
P P P PP P P P + P P P S P PP
Sbjct: 7 PNYPPGNPNQPPPFPPTPYYPMYQAGMPMPYIPQSPQYPQPGPP 50
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = +3
Query: 576 PSPXXPXHXPP---SPPHIXPXPXXPXKRXXXPPPXPHSXXAPXSXPP 710
P P P PP PP P P PPP P P PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 558 LSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXP 677
+S P P P PP PP P P K PPP P
Sbjct: 337 ISGGPPPPPPPPGGCPPPPP---PPPPGGFKGGPPPPPPP 373
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 8.0
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHSXXAPXS 701
P P L P P+ P PP I P P PPP P + A S
Sbjct: 324 PPPPPPMKLDPSPQPAAT-PVEITEIPPIISPPAPPPPPPPPPPPPPPQTPSASSS 378
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Frame = +3
Query: 543 PXAXTLSPXKXPSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPP-----XPHSXXAPXSXP 707
P T +P P P H P PP P PPP P S AP P
Sbjct: 481 PLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPP 540
Query: 708 P 710
P
Sbjct: 541 P 541
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 28.7 bits (61), Expect = 8.0
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 534 PXXPXAXTLSPXKXPSPXXPXHXPPSPPHIXPXP-XXPXKRXXXPPPXPH 680
P P + T++P K SP P PP + P P P + PP PH
Sbjct: 192 PPQPMS-TVAPFKHNSPVRRQLVDPLPPLLQPSPVRFPAQPWQIPPLHPH 240
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 576 PSPXXPXHXPPSPPHIXPXPXXPXKRXXXPPPXPHS 683
P P H PPH P P PPP P S
Sbjct: 77 PPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQS 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,217,333
Number of Sequences: 27780
Number of extensions: 148091
Number of successful extensions: 1635
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3057296194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -